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Table 2 Genotype concordance metrics

From: Variant discovery in targeted resequencing using whole genome amplified DNA

Dataset

NRS

NRD

whole-exome capture SNPs

98.28

0.63

whole-exome capture INDELs

91.17

13.46

chr12 capture SNPs

99.63

0.29

chr12 capture INDELs

94.07

10.7

  1. NRS and NRD values for WGA derived whole-exome and chr12 capture call sets when comparing to genomic call sets.
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BMC Genomics

ISSN: 1471-2164

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