| Ka (±S. E.) | Ks (±S. E.) | Ka/Ks (±S. E.) |
---|---|---|---|
Frankia ACN/ CcI | Â | Â | Â |
Signal Peptide (SP) | 0.897 ± 0.335 | 11.698 ± 2. 627 | 0.182 ± 0.031 |
Mature Peptide (MP) | 0.151 ± 0.009 | 10.499 ± 3. 11 | 0.066 ± 0.005 |
Secretory Protein (Sec) | 0.105 ± 0.006 | 6.893 ± 2. 006 | 0.051 ± 0.003 |
Non-secretory Protein (NSec) | 0.083 ± 0.002 | 6.555 ± 0.614 | 0.043 ± 0.001 |
Frankia ACN/ FD | Â | Â | Â |
Signal Peptide (SP) | 0.5656 ± 0.2004 | 24.4256 ± 14.1669 | 0.1952 ± 0.063 |
Mature Peptide (MP) | 0.2370 ± 0.0328 | 12.1243 ± 9.3627 | 0.0980 ± 0.028 |
Secretory Protein (Sec) | 0.2690 ± 0.0255 | 27.415 ± 10.51547 | 0.077 ± 0.0211 |
Non-secretory Protein (NSec) | 0.1862 ± 0.0028 | 31.77567 ± 1.283 | 0.0336 ± 0.001 |
Frankia ACN/ Ean | Â | Â | Â |
Signal Peptide (SP) | 2.14 ± 0.6975 | 23.82 ± 4. 32 | 0.479 ± 0.262 |
Mature Peptide (MP) | 0.194 ± 0.0124 | 29.85 ± 6. 224 | 0.0363 ± 0.005 |
Secretory Protein (Sec) | 0.183 ± 0.008 | 29.785 ± 4. 460 | 0.040 ± 0.004 |
Non-secretory Protein (NSec) | 0.144 ± 0.002 | 23.688 ± 1. 120 | 0.036 ± 0.001 |
Frankia ACN/ Eul | Â | Â | Â |
Signal Peptide (SP) | 2. 99 ± 0.754 | 29. 198 ± 4. 055 | 0.568 ± 0.211 |
Mature Peptide (MP) | 0.258 ± 0.011 | 50.244 ± 6. 94 | 0.035 ± 0.004 |
Secretory Protein (Sec) | 0.235 ± 0.008 | 36. 971 ± 4. 836 | 0.043 ±0.004 |
Non-secretory Protein (NSec) | 0.178 ± 0.003 | 33. 228 ± 1. 306 | 0.035 ± 0.001 |
Frankia CcI/FD | Â | Â | Â |
Signal Peptide (SP) | 0.3762 ± 0.0565 | 5.4064 ± 2.5889 | 0.2136 ± 0.0524 |
Mature Peptide (MP) | 0.2367 ± 0.0208 | 19.3491 ± 9.5834 | 0.0581 ± 0.0104 |
Secretory Protein (Sec) | 0.265 ± 0.02113 | 18.01 ± 7.5958 | 0.0633 ± 0.0103 |
Non-secretory Protein (NSec) | 0.1901 ± 0.003 | 28.1726 ± 1.158 | 0.0334 ± 0.001 |
Frankia CcI/ Ean | Â | Â | Â |
Signal Peptide (SP) | 0.451 ± 0.125 | 12.861 ± 6.345 | 0.139 ± 0.054 |
Mature Peptide (MP) | 0.206 ± 0.015 | 23.179 ± 10.192 | 0.043 ± 0.008 |
Secretory Protein (Sec) | 0.179 ± 0.010 | 35.333 ± 4. 793 | 0.027 ± 0.003 |
Non-secretory Protein (NSec) | 0.147 ± 0.002 | 24.320 ± 1. 059 | 0.031 ± 0.001 |
Frankia CcI/ Eu1 | Â | Â | Â |
Signal Peptide (SP) | 2.202 ± 1. 866 | 13.475 ± 8. 425 | 0.282 ± 0.111 |
Mature Peptide (MP) | 0.143 ± 0.025 | 21.280 ± 9. 465 | 0.070 ± 0.014 |
Secretory Protein (Sec) | 0.097 ± 0.006 | 5.761 ± 2. 462 | 0.061 ± 0.005 |
Non-secretory Protein (NSec) | 0.097 ± 0.015 | 5.244 ± 0.511 | 0.047 ± 0.001 |
Frankia FD/ Eu1 | Â | Â | Â |
Signal Peptide (SP) | 0.450 ± 0.125 | 12.86 ± 6.34 | 0.138 ± 0.053 |
Mature Peptide (MP) | 0.205 ± 0.015 | 23.179 ± 10.19 | 0.0429 ± 0.008 |
Secretory Protein (Sec) | 0.307 ± 0.015 | 30.9 ± 10.99 | 0.0502 ± 0.0125 |
Non-secretory Protein (NSec) | 0.189 ± 0.002 | 25.7 ± 1.32 | 0.0288 ± 0.009 |
Frankia FD/ Ean | Â | Â | Â |
Signal Peptide (SP) | 2.202 ± 1.865 | 13.475 ± 8.4 | 0.282 ± 0.11 |
Mature Peptide (MP) | 0.143 ± 0.022 | 21.28 ± 5.96 | 0.070 ± 0.011 |
Secretory Protein (Sec) | 0.329 ± 0.016 | 29.094 ±10.111 | 0.053 ± 0.011 |
Non-secretory Protein (NSec) | 0.203 ± .002 | 23.128 ± 8.98 | 0.028 ± .009 |
Frankia Ean/ Eul | Â | Â | Â |
Signal Peptide (SP) | 0.677 ± 0.037 | 20.845 ± 8. 942 | 0.321 ± 0.034 |
Mature Peptide (MP) | 0.235 ± 0.021 | 23.780 ± 7. 688 | 0.065 ± 0.005 |
Secretory Protein (Sec) | 0.230 ± 0.009 | 51.172 ± 5. 025 | 0.033 ± 0.001 |
Non-secretory Protein (NSec) | 0.201 ± 0.013 | 32.649 ± 1. 250 | 0.032 ± 0.004 |
S. coelicolor/S. avermitilis | Â | Â | Â |
Signal Peptide (SP) | 0.483 ± 0.157 | 10.529 ± 2. 48 | 0.166 ±0.016 |
Mature Peptide (MP) | 0.144 ± 0.005 | 11.029 ± 3. 42 | 0.061 ± 0.003 |
Secretory Protein (Sec) | 0.142 ± 0.005 | 13.460 ± 3. 072 | 0.066 ± 0.003 |
Non-secretory Protein (NSec) | 0.109 ± 0.002 | 10.344 ± 0.601 | 0.052 ± 0.001 |
S. coelicolor/S. griseus | Â | Â | Â |
Signal Peptide (SP) | 0.952 ± 0.229 | 26.889 ± 3.260 | 0.157 ± 0.0250 |
Mature Peptide (MP) | 0.210 ± 0.007 | 28.96 ± 5.938 | 0.049 ±0.003 |
Secretory Protein (Sec) | 0.226 ± 0.007 | 39.273 ± 4.598 | 0.048 ± 0.004 |
Non-secretory Protein (NSec) | 0.166 ± 0.002 | 27.224 ± 0.941 | 0.043 ± 0.001 |
S. coelicolor- S. somaliensis | Â | Â | Â |
Signal Peptide (SP) | 1.648 ± 0.439 | 26.224 ± 5.183 | 0.324 ± 0.113 |
Mature Peptide (MP) | 0.227 ± 0.009 | 35.567 ± 3.675 | 0.033 ± 0.005 |
Secretory Protein (Sec) | 0.235 ± 0.005 | 45.582 ± 7.275 | 0.041 ± 0.005 |
Non-secretory Protein (NSec) | 0.151 ± 0.002 | 26.060 ± 1.209 | 0.040 ± 0.001 |
S. coelicolor- S. scabiei | Â | Â | Â |
Signal Peptide (SP) | 0.585 ± 0.126 | 15.974 ± 2.126 | 0.177 ± 0.016 |
Mature Peptide (MP) | 0.172 ± 0.005 | 18.214 ± 3.100 | 0.057 ± 0.003 |
Secretory Protein (Sec) | 0.159 ± 0.008 | 15.480 ± 4.913 | 0.067 ± 0.005 |
Non-secretory Protein (NSec) | 0.103 ± 0.002 | 10.699 ± 0.802 | 0.050 ± 0.001 |
S. avermitilis- S. somaliensis | Â | Â | Â |
Signal Peptide (SP) | 0.634 ± 0.101 | 23.098 ± 4.180 | 0.347 ± 0.088 |
Mature Peptide (MP) | 0.233 ± 0.009 | 43.112 ± 6.251 | 0.040 ± 0.005 |
Secretory Protein (Sec) | 0.236 ± 0.008 | 41.932 ± 6.196 | 0.042 ± 0.005 |
Non-secretory Protein (NSec) | 0.147 ± 0.002 | 27.533 ± 1.286 | 0.036 ± 0.001 |
S. avermitilis- S. scabiei | Â | Â | Â |
Signal Peptide (SP) | 0.554 ± 0.146 | 12.172 ± 1.912 | 0.268 ± 0.038 |
Mature Peptide (MP) | 0.164 ± 0.005 | 13.605 ± 2.619 | 0.068 ± 0.003 |
Secretory Protein (Sec) | 0.134 ± 0.006 | 3.663 ± 1.879 | 0.084 ± 0.005 |
Non-secretory Protein (NSec) | 0.096 ± 0.002 | 7.412 ± 0.719 | 0.055 ± 0.001 |
S. avermitilis/ S. griseus | Â | Â | Â |
Signal Peptide (SP) | 1.359 ± 0.326 | 21.298 ± 2.755 | 0.504 ± 0.036 |
Mature Peptide (MP) | 0.210 ± 0.007 | 48.403 ± 6.312 | 0.037 ± 0.003 |
Secretory Protein (Sec) | 0.234 ± 0.006 | 44. 581 ± 4.500 | 0.047 ± 0.005 |
Non-secretory Protein (NSec) | 0.158 ± 0.002 | 26. 284 ± 0.889 | 0.040 ± 0.001 |
S. somaliensis- S. scabiei | Â | Â | Â |
Signal Peptide (SP) | 1.346 ± 0.450 | 25.264 ± 4.391 | 0.492 ± 0.283 |
Mature Peptide (MP) | 0.223 ± 0.007 | 24.696 ± 5.321 | 0.032 ± 0.004 |
Secretory Protein (Sec) | 0.232 ± 0.008 | 42.124 ± 6.385 | 0.056 ± 0.006 |
Non-secretory Protein (NSec) | 0.151 ± 0.002 | 27.537 ± 1.294 | 0.035 ± 0.004 |
S. somaliensis- S. griseus | Â | Â | Â |
Signal Peptide (SP) | 0.565 ± 0.145 | 20.919 ± 3.434 | 0.170 ± 0.026 |
Mature Peptide (MP) | 0.220 ± 0.009 | 42.007 ± 6.413 | 0.034 ± 0.004 |
Secretory Protein (Sec) | 0.197 ± 0.006 | 38.510 ± 6.153 | 0.043 ± 0.005 |
Non-secretory Protein (NSec) | 0.157 ± 0.039 | 20.710 ± 3.643 | 0.041 ± 0.003 |
S. scabiei- S. griseus | Â | Â | Â |
Signal Peptide (SP) | 0.734 ± 0.178 | 22.970 ± 2.788 | 0.743 ± 0.256 |
Mature Peptide (MP) | 0.216 ± 0.007 | 49.319 ± 6.226 | 0.037 ± 0.003 |
Secretory Protein (Sec) | 0.211 ± 0.008 | 36.526 ± 6.828 | 0.046 ± 0.005 |
Non-secretory Protein (NSec) | 0.148 ± 0.002 | 24.148 ± 1.233 | 0.040 ± 0.001 |
M. tuberculosis/M. leprae | Â | Â | Â |
Signal Peptide (SP) | 0.414 ± 0.0408 | 12.978 ± 6.284 | 0.165 ± 0.069 |
Mature Peptide (MP) | 0.111 ± 0.011 | 1.406 ± 0.055 | 0.079 ± 0.008 |
Secretory Protein (Sec) | 0.137 ± 0.009 | 1.4109 ± 0.076 | 0.099 ± 0.008 |
Non-secretory Protein (NSec) | 0.122 ± 0.002 | 2.173 ± 0.288 | 0.088 ± 0.001 |
M. tuberculosis/M. smegmatis | Â | Â | Â |
Signal Peptide (SP) | 1.059 ± 0.273 | 30.888 ± 8.194 | 0.098 ± 0.031 |
Mature Peptide (MP) | 0.199 ± 0.021 | 23.071 ± 10.099 | 0.043 ± 0.014 |
Secretory Protein (Sec) | 0.239 ± 0.017 | 39.868 ± 9.856 | 0.032 ± 0.0105 |
Non-secretory Protein (NSec) | 0.163 ± 0.003 | 28.329 ± 1.413 | 0.030 ± 0.001 |
M. tuberculosis/ M. ulcerans | Â | Â | Â |
Signal Peptide (SP) | 0.685 ± 0.258 | 8.146 ± 3.966 | 0.436 ± 0.159 |
Mature Peptide (MP) | 0.109 ± 0.014 | 5.997 ± 4.625 | 0.069 ± 0.010 |
Secretory Protein (Sec) | 0.127 ± 0.012 | 1.48434 ± 0.077 | 0.0864 ± 0.007 |
Non-secretory Protein (NSec) | 0.096 ± 0.002 | 2.616 ± 0.353 | 0.065 ± 0.001 |
M. tuberculosis/ M. vanbaalenii | Â | Â | Â |
Signal Peptide (SP) | 0.821 ± 0.083 | 13.294 ± 5.633 | 0.247 ± 0.072 |
Mature Peptide (MP) | 0.226 ± 0.018 | 21.208 ± 9.415 | 0.053 ± 0.012 |
Secretory Protein (Sec) | 0.247 ± 0.015 | 20.711 ± 7.419 | 0.049 ± 0.009 |
Non-secretory Protein (NSec) | 0.168 ± 0.003 | 26.060 ± 1.344 | 0.032 ± 0.001 |
M. leprae/ M. smegmatis | Â | Â | Â |
Signal Peptide (SP) | 1.003 ± 0.129 | 20.464 ± 6.323 | 0.207 ± 0.062 |
Mature Peptide (MP) | 0.247 ± 0.025 | 16.558 ± 5.325 | 0.0278 ± 0.005 |
Secretory Protein (Sec) | 0.281 ± 0.018 | 34.78545 ± 6.822 | 0.02763 ± 0.006 |
Non-secretory Protein (NSec) | 0.188 ± 0.003 | 28.210 ± 1.291 | 0.026 ± 0.001 |
M. leprae/ M. ulcerans | Â | Â | Â |
Signal Peptide (SP) | 0.462 ± 0.056 | 14.975 ± 6.791 | 0.273 ± 0.080 |
Mature Peptide (MP) | 0.158 ± 0.021 | 6.794 ± 4.753 | 0.0731 ± 0.009 |
Secretory Protein (Sec) | 0.176 ± 0.020 | 5.359 ± 3.338 | 0.081 ± 0.007 |
Non-secretory Protein (NSec) | 0.132 ± 0.003 | 2.877 ± 0.312 | 0.070 ± 0.002 |
M. leprae/ M. vanbalanii | Â | Â | Â |
Signal Peptide (SP) | 1.322 ± 0.349 | 33.707 ± 8.948 | 0.115 ± 0.048 |
Mature Peptide (MP) | 0.278 ± 0.0267 | 17.136 ± 6.912 | 0.038 ± 0.006 |
Secretory Protein (Sec) | 0.302 ± 0.021 | 25.442 ± 6.775 | 0.041 ± 0.008 |
Non-secretory Protein (NSec) | 0.193 ± 0.004 | 25.629 ± 1.238 | 0.029 ± 0.001 |
M. smegmatis / M. ulcerans | Â | Â | Â |
Signal Peptide (SP) | 1.409 ± 0.415 | 18.212 ± 5.189 | 0.293 ± 0.138 |
Mature Peptide (MP) | 0.225 ± 0.0184 | 18.889 ± 7.0584 | 0.041947 ± 0.007 |
Secretory Protein (Sec) | 0.257 ± 0.017 | 27.432 ± 6.438 | 0.037 ± 0.006 |
Non-secretory Protein (NSec) | 0.163 ± 0.003 | 28.286 ± 1.443 | 0.030008 ± 0.001 |
M. smegmatis / M. vanbaalenii | Â | Â | Â |
Signal Peptide (SP) | 3.458 ± 1.548 | 19.415 ± 5.519 | 0.668 ± 0.356 |
Mature Peptide (MP) | 0.1737 ± 0.014936 | 19.717 ± 8.35107 | 0.0518 ± 0.0084 |
Secretory Protein (Sec) | 0.2046 ± 0.01668 | 23.418 ± 7.994028 | 0.0621 ± 0.0111 |
Non-secretory Protein (NSec) | 0.1252 ± 0.0027 | 16.09933 ± 1.215 | 0.0416 ± 0.0014 |
M. ulcerans / M. vanbaalenii | Â | Â | Â |
Signal Peptide (SP) | 1.640 ± 0.833 | 20.487 ± 5.451 | 0.1985 ± 0.0625 |
Mature Peptide (MP) | 0.2575 ± 0.017255 | 13.6171 ± 4.540 | 0.0524 ± 0.0084 |
Secretory Protein (Sec) | 0.2721 ± 0.0158 | 24.692 ± 6.523 | 0.0438 ± 0.0071 |
Non-secretory Protein (NSec) | 0.165 ± 0.0031 | 27.909 ± 1.427 | 0.0309 ± 0.0011 |