Skip to main content

Table 6 The correlation between microarray and qRT-PCR results

From: Oxaliplatin induces different cellular and molecular chemoresistance patterns in colorectal cancer cell lines of identical origins

Accession # Gene symbol Gene name Microarray qRT-PCR Pearson correlation r (p)
Fold regulation p value Fold regulation p value
Colo320R
NM_030667 PTPRO Protein tyrosine phosphatase, receptor type, O 1.58 2.58E-05 2.36 3E-04 0.97 (9E-04)
NM_000224 KRT18 Keratin 18, transcript variant 1 1.87 7.29E-08 2.71 2E-04
NM_006096 NDRG1 N-myc downstream regulated 1 1.78 7.96E-07 1.55 0.04
NM_020371 AVEN Apoptosis, caspase activation inhibitor 1.50 4.74E-06 1.79 5E-03
NM_007191 WIF1 WNT inhibitory factor 1 -1.72 2.35E-07 -2.08 3E-04
NM_002165 ID1 Inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 2.20 1.97E-08 2.45 4E-04
HT-29R
NM_030667 PTPRO Protein tyrosine phosphatase, receptor type, O 1.85 1.93E-08 4.22 2.70E-05 0.89 (1.6E-02)
NM_000224 KRT18 Keratin 18, transcript variant 1 1.54 1.81E-07 1.31 4E-04
NM_006096 NDRG1 N-myc downstream regulated 1 -1.75 1.55E-07 -2.17 4E-04
NM_000660 TGFB1 Transforming growth factor, beta 1 1.66 1.10E-09 2.12 0.001
NM_001012334 MDK Midkine (neurite growth-promoting factor 2) 2.22 3.51E-11 4.29 0.001
NM_001554 CYR61 Cysteine-rich, angiogenic inducer, 61 1.56 5.62E-09 1.72 4.49E-05