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Table 5 Selected GO categories: P. patens in comparison to A. thaliana

From: Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions

Gene family q-value GO term id GO term P. patens A. thaliana
Two component system – histidine kinases and response regulators 6.91E-26 GO:0000160 two-component signal transduction system (phosphorelay) 124 78
4.60E-24 GO:0018106 peptidyl-histidine phosphorylation 72 3
1.03E-28 GO:0000155 two-component sensor activity 95 3
1.34E-08 GO:0000156 two-component response regulator activity 86 35
LHCs 1.39E-09 GO:0009765 photosynthesis, light harvesting 45 21
flagellum 0.000155148 GO:0001539 ciliary or flagellar motility 10 -
3.11E-05 GO:0019861 flagellum 19 -
0.000496321 GO:0030286 dynein complex 12 -
PAL 0.000726755 GO:0006559 L-phenylalanine catabolic process 14 3
0.010050079 GO:0016841 ammonia-lyase activity 17 5
ALDH 0.000574734 GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity 18 4
  1. The GO enrichment analysis was performed using topGO with a q-value cut-off <0.05. Depicted are only GO terms overrepresented in P. patens and associated with the gene families reported to be expanded in P. patens.