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Table 1 Integrase genes identified in specific pneumococcal genetic elements, grouped by nucleotide sequence similarity

From: Evidence of antimicrobial resistance-conferring genetic elements among pneumococci isolated prior to 1974

Group

Integrase

Genetic elementa

Genbank

gene type

representativea

accession no.

1

int Tn916

Tn1311(a)

FN667862.2

  

Tn1545

X61025.1

  

Tn2010

AB426620.1

  

Tn5251

FJ711160.1

  

Tn5253(a)

EU351020.1

  

Tn6003

AM410044.5

  

ICESpn 11876(a)

FR671404.1

  

ICESpn 11930(a)

FR671403.1

2

int ICESp 23FST81

ICESpn 11876(b)

FR671404.1

  

ICESpn 6094

FR670347.2

3

int ICESpn 8140

ICESpn 8140

FR671412.1

4

int Tn5252

Tn1131(b)

FN667862.2

  

Tn5253(b)

EU351020.1

  

ICESpn 11930(b)

FR671403.1

  1. a. (a) and (b) refer to pairs of different integrase genes found in elements Tn1131, Tn5253, ICESpn 11876 and ICESpn 11930. Other representatives of genetic elements in these groups may be found in the ICEberg database (http://db-mml.sjtu.edu.cn/ICEberg/).