Table 18 Epigenetic and DNA-remodelling proteins in the predicted proteome of A. digitifera
Gene sequence | KEGG Orthology | Encoded protein description |
|---|---|---|
v1.04426; v1.02042 | K02528 | 16S rRNA (adenine1518-N6/1519-N6)-dimethyltransferase |
v1.22358; v1.00249 | K14191 | 18S rRNA (adenine1779-N6/1780-N6)-dimethyltransferase |
v1.19400; v1.04238 | K00561 | 23S rRNA (adenine2085-N6)-dimethyltransferase |
v1.05107; v1.05242 | K01488 | Adenosine deaminase |
v1.04152; v1.09790 | K14857 | AdoMet-dependent rRNA methyltransferase SPB1 |
v1.00197 | K13530 | AraC family transcriptional regulator DNA methyltransferase |
v1.12967; v1.19789; v1.07763 | K14589 | Cap-specific mRNA (nucleoside-2′-O-)-methyltransferase 1 |
v1.24281 | K01489 | Cytidine deaminase |
v1.16211; v1.14952; v1.01094; v1.06983 | K00558 | DNA (cytosine-5-)-methyltransferase |
v1.19683; v1.05688; v1.04223 | K11324 | DNA methyltransferase 1-associated protein 1 |
v1.14033; v1.19860; v1.19081; v1.04188 | K11420 | Euchromatic histone-lysine N-methyltransferase |
v1.02068 | K01487 | Guanine deaminase |
v1.02920 | K05931 | Histone-arginine methyltransferase CARM1 |
v1.17589 [+ 7 other sequence copies] | K11446 | Histone demethylase JARID1 |
v1.07640 | K06101 | Histone-lysine N-methyltransferase ASH1L |
v1.13515; v1.18577; v1.20187; v1.19182 | K09186 | Histone-lysine N-methyltransferase MLL1 |
v1.08381 | K09187 | Histone-lysine N-methyltransferase MLL2 |
v1.24258; v1.19182 | K09188 | Histone-lysine N-methyltransferase MLL3 |
v1.07992; v1.10302; v1.13829 | K09189 | Histone-lysine N-methyltransferase MLL5 |
v1.06939; v1.15255; v1.15254 | K11424 | Histone-lysine N-methyltransferase NSD1/2 |
v1.05552 | K11422 | Histone-lysine N-methyltransferase SETD1 |
v1.07744 | K11423 | Histone-lysine N-methyltransferase SETD2 |
v1.03190 | K11431 | Histone-lysine N-methyltransferase SETD7 |
v1.21867 | K11428 | Histone-lysine N-methyltransferase SETD8 |
v1.18700 [+ 8 other sequence copies] | K11421 | Histone-lysine N-methyltransferase SETDB |
v1.07557; v1.11409 | K11419 | Histone-lysine N-methyltransferase SUV39H |
v1.24733; v1.13497 | K11429 | Histone-lysine N-methyltransferase SUV420H |
v1.15405; v1.10291; v1.17601; v1.02845; v1.08629 | K11450 | Lysine-specific histone demethylase 1 |
v1.23155; v1.09394; v1.17624; v1.05370 | K14835 | Ribosomal RNA methyltransferase Nop2 |
v1.18460 [+ 6 other sequence copies] | K03500 | Ribosomal RNA small subunit methyltransferase B |
v1.07407; v1.03110 | K08316 | Ribosomal RNA small subunit methyltransferase D |
v1.12193 | K02427 | Ribosomal RNA large subunit methyltransferase E |
v1.11499 | K11392 | Ribosomal RNA small subunit methyltransferase F |
v1.16053; v1.12676 | K03437 | RNA methyltransferase, TrmH family |
v1.12453; v1.05459 | K13097 | Methylcytosine dioxygenase |
v1.07692 | K07451 | 5-Methylcytosine-specific restriction enzyme A |
v1.21815; v1.17113 | K00565 | mRNA (guanine-N7-)-methyltransferase |
v1.06363; v1.03360; v1.21218 | K05925 | mRNA (2′-O-methyladenosine-N6-)-methyltransferase |
v1.09661 | K07442 | tRNA (adenine-N1-)-methyltransferase catalytic subunit |
v1.08094; v1.04036; v1.18614 | K03256 | tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit |
v1.11456; v1.00738; v1.04577 | K03439 | tRNA (guanine-N7-)-methyltransferase |
v1.08042 | K14864 | tRNA methyltransferase |
v1.20501 | K00557 | tRNA (uracil-5-)-methyltransferase |
v1.15147 | K14964 | Set1/Ash2 histone methyltransferase subunit ASH2 |
v1.08925 | K00571 | Site-specific DNA-methyltransferase (adenine-specific) |