Table 1 The distribution of total small RNA tags by Solexa sequencing
From: Discovery of cashmere goat (Capra hircus) microRNAs in skin and hair follicles by Solexa sequencing
Type | Anagen | Catagen | Telogen | Total | |||
|---|---|---|---|---|---|---|---|
| Â | Counts | Percent (%) | Counts | Percent (%) | Counts | Percent (%) | Â |
total_reads | 16,861,573 | Â | 18,788,688 | Â | 27,458,743 | Â | 63,109,004 |
high_quality | 16,756,965 | 100 | 18,729,213 | 100 | 27,307,694 | 100 | 62,793,872 |
3′adapter_null | 57,530 | 0.34 | 5433 | 0.03 | 44,385 | 0.16 | 107,348 |
insert_null | 103,836 | 0.62 | 81,245 | 0.43 | 76,673 | 0.28 | 261,754 |
5′adapter_contaminants | 30,860 | 0.18 | 31,809 | 0.17 | 15,778 | 0.06 | 78,447 |
smaller_than_18nt | 566,742 | 3.38 | 498,627 | 2.66 | 154,658 | 0.57 | 1,220,027 |
polyA | 169 | 0.00 | 187 | 0.00 | 188 | 0.00 | 544 |
clean_reads | 15,997,828 | 95.47 | 18,111,912 | 96.70 | 27,016,012 | 98.93 | 61,125,752 |