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Figure 7 | BMC Genomics

Figure 7

From: Confero: an integrated contrast data and gene set platform for computational analysis and biological interpretation of omics data

Figure 7

Screenshot of the Confero Analyze Data Tool (GSEA). Selecting the analysis algorithm “GSEA Preranked” enables to select specific parameters for GSEA in the Galaxy menu. Confero DB is automatically populated by gene sets as new contrast data or manually curated gene sets are imported into the database. Therefore, having the ability to filter/search gene sets in a specific manner is crucial to have the possibility to address specific biological questions. A filtering/searching functionality (enabling to search gene sets by organism, tissue/cells, stimulus using specific filters or free text expression) is currently available in the Analyzed Data tool and will be enhanced in future developments.

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