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Table 2 Possible C parvum transcription factors

From: Genome-wide upstream motif analysis of Cryptosporidium parvum genes clustered by expression profile

Domain

# of C. parvum proteins

ApiAP2

19

E2F/TDP

2/3

MYB

9*

Zinc finger

 

  GATA DNA-binding

3

  C2H2

27*

bZIP

 

  CCAAT-binding

3

  other

1

  1. Domains commonly associated with transcription factors and their counts in C. parvum as determined by text searches at CryptoDB.org. ApiAP2 protein counts determined using custom-built HMMs. *Presence of several of these domains, particularly the C2H2 Zinc finger and Myb, do not necessarily indicate the protein acts as a transcription factor.
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BMC Genomics

ISSN: 1471-2164

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