Figure 2

Phylogenetic profiling of datasets A and B. Phylogenetic profiling of detected bacterial taxa for 16S rDNA and rRNA sequences obtained from pyrosequencing (a) and for mRNA reads obtained from Illumina sequencing (b). Both 16S and mRNA reads were classified into genus (colour key), or family (light grey), classified reads and the remaining unclassified reads (dark grey), based on the applied cut off (see methods). Only genera that contribute at least 2% to one of the profiles were represented. Separate phylogenetic profiling at genus level using 16S and mRNA reads of both datasets is presented in figure S4.