Table 1 The full repertoire of secretion systems of P. fluorescens F113
Secretion system | Phylogenetic cluster | Locus | Putative substrate |
|---|---|---|---|
T1SS | Â | PSF113_0209-0211 | PSF113_0208 |
| Â | Â | opmH (PSF113_0530)* | Â |
| Â | Â | PSF113_1508-1510 | PSF113_1511 |
| Â | Â | PSF113_2734-2736 | PSF113_2737 |
| Â | Â | aprDEF (PSF113_2945-2947) | aprA (PSF113_2949), aprI (PSF113_2948), lipA (PSF113_2944) |
| Â | Â | PSF113_3005-3007 | psmE (PSF113_3004) |
| Â | Â | PSF113_3055-3056* | Â |
| Â | Â | PSF113_3303-3305 | Â |
T2SS | Xcp | xcpP-Z (PSF113_0437-0447), xcpA (PSF113_5006) | PSF113_0435, PSF113_0610, PSF113_2337, PSF113_3279 |
| Â | Hxc | hxcP-Z ( PSF113_3690-3700) | psp (PSF113_3701) |
T3SS | SPI-I | invF-orgB (PSF113_1778-1801) | PSF113_1802 |
| Â | Hrp1 | rspS-rspL (PSF113_5585-5610) | ropAA-1 (PSF113_1126), ropAA-2 (PSF113_3486), ropB (PSF113_5598), ropM (PSF113_5616) |
T4SS | GI-like | PSF113_3314-3334 | Â |
T5aSS | Â | PSF113_2779 | Â |
| Â | Â | PSF113_2780 | Â |
| Â | Â | PSF113_4399 | Â |
| Â | Â | estA (PSF113_5339) | Â |
| Â | Â | PSF113_5848 | Â |
T5bSS | Â | PSF113_0792-0793 | Â |
| Â | Â | PSF113_1489-1490 | Â |
| Â | Â | PSF113_4466-4468 | Â |
| Â | Â | PSF113_2623-PSF113_3702 | Â |
T5dSS | Â | plpD (PSF113_1517) | Â |
T6SS | I | HSI-II (PSF113_5815-5833) | hcp2 (PSF113_1976), PSF113_0495, PSF113_0666, PSF113_3144, PSF113_3904 |
| Â | III | HSI-I (PSF113_5785-5808) | vgrG1b (PSF113_2885) |
| Â | IVA | HSI-III (PSF113_2407-2422) | Â |