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Table 3 Blast results of modulated transcripts grouped in GO term ‘chitinase activity

From: Solanum torvum responses to the root-knot nematode Meloidogyne incognita

ID Blast2GO annotation Length Best hit desc. Conserved domains Hit ACC E value Expr ratio (infected/control)
Tor5_s26850 Wound-induced protein win2 443 Gi|19962|emb|CAA41437.1|pathogenesis-related protein 4A [Nicotiana tabacum] Barwin family pfam 00967 CAA41437 5.87E-036 3.94
Tor5_c3883 Wound-induced protein win1 644 Gi|19962|emb|CAA41437.1|pathogenesis-related protein 4A [Nicotiana tabacum] Barwin family pfam 00967 CAA41437 6.97E-083 3.96
Tor5_c8583 Class ii chitinase 568 Gi|544010|sp|Q05540.1|CHIB_SOLLC RecName: Full=Acidic 27 kDa endochitinase; Flags: Precursor >gi|19187|emb|CAA78844.1| chitinase [Solanum lycopersicum] Glycoside hydrolase family 19 chitinase domain Q05540 7.18E-101 3.49
Tor5_c6621 Class v chitinase 694 Gi|899342|emb|CAA54373.1|chitinase class V [Nicotiana tabacum] Class V plant chitinases Glycosyl hydrolase family 18 Specific hit Cd02879 Superfamily cl10447 CAA54373 1.52E-090 2.55
Tor5_rep_c7838 Class i extracellular chitinase 669 Gi|21495|emb|CAA47921.1|chitinase [Solanum tuberosum] Specific hit: Glycoside hydrolase family 19 chitinase domain (cd00325) Superfamily: lysozime like domain (cl00222) CAA47921 2.89E-094 2.24
Tor5_rep_c1712 Chia_tobac ame: full=acidic endochitinase flags: precursor 627 Gi|116332|sp|P29060.1|CHIA_TOBACRecName: Full=Acidic endochitinase; Flags: Precursor >gi|19775|emb|CAA77656.1| acidic chitinase III [Nicotiana tabacum] Specific hit: cd02877 Superfamily: GH18 Glycosyl hydrolase family 18 Cl10447 P29060 6.82E-098 2.03