Table 3 Blast results of modulated transcripts grouped in GO term ‘chitinase activity’
From: Solanum torvum responses to the root-knot nematode Meloidogyne incognita
ID | Blast2GO annotation | Length | Best hit desc. | Conserved domains | Hit ACC | E value | Expr ratio (infected/control) |
|---|---|---|---|---|---|---|---|
Tor5_s26850 | Wound-induced protein win2 | 443 | Gi|19962|emb|CAA41437.1|pathogenesis-related protein 4A [Nicotiana tabacum] | Barwin family pfam 00967 | CAA41437 | 5.87E-036 | 3.94 |
Tor5_c3883 | Wound-induced protein win1 | 644 | Gi|19962|emb|CAA41437.1|pathogenesis-related protein 4A [Nicotiana tabacum] | Barwin family pfam 00967 | CAA41437 | 6.97E-083 | 3.96 |
Tor5_c8583 | Class ii chitinase | 568 | Gi|544010|sp|Q05540.1|CHIB_SOLLC RecName: Full=Acidic 27 kDa endochitinase; Flags: Precursor >gi|19187|emb|CAA78844.1| chitinase [Solanum lycopersicum] | Glycoside hydrolase family 19 chitinase domain | Q05540 | 7.18E-101 | 3.49 |
Tor5_c6621 | Class v chitinase | 694 | Gi|899342|emb|CAA54373.1|chitinase class V [Nicotiana tabacum] | Class V plant chitinases Glycosyl hydrolase family 18 Specific hit Cd02879 Superfamily cl10447 | CAA54373 | 1.52E-090 | 2.55 |
Tor5_rep_c7838 | Class i extracellular chitinase | 669 | Gi|21495|emb|CAA47921.1|chitinase [Solanum tuberosum] | Specific hit: Glycoside hydrolase family 19 chitinase domain (cd00325) Superfamily: lysozime like domain (cl00222) | CAA47921 | 2.89E-094 | 2.24 |
Tor5_rep_c1712 | Chia_tobac ame: full=acidic endochitinase flags: precursor | 627 | Gi|116332|sp|P29060.1|CHIA_TOBACRecName: Full=Acidic endochitinase; Flags: Precursor >gi|19775|emb|CAA77656.1| acidic chitinase III [Nicotiana tabacum] | Specific hit: cd02877 Superfamily: GH18 Glycosyl hydrolase family 18 Cl10447 | P29060 | 6.82E-098 | 2.03 |