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Figure 7 | BMC Genomics

Figure 7

From: Genome-wide analyses of Epstein-Barr virus reveal conserved RNA structures and a novel stable intronic sequence RNA

Figure 7

Hairpin structure predicted in BBLF2/3 mRNA. (A) Hairpin modeled for the EBV BBLF2/3 short intron. Splice donor and acceptor sites are indicated with dark and light blue arrows, respectively. Nucleotide numbers in parentheses correspond to the reverse genome strand models in Additional file 3 (locus 152). The predicted free energy (in kcal/mol) and z-score of the hairpin are shown. (B) Homologous hairpin structure in MHV4. The BBLF2 translation stop codon is shaded in red and the BBLF3 start codon is shown in green.

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