From: Transcriptome deep-sequencing and clustering of expressed isoforms from Favia corals
Top frequent GO-annotated homologous protein clusters in Fav1 | ||
---|---|---|
Go categories/Description | Count | Percentage |
Total clusters | 7,187 | Â |
Total (GO-annotated) | 4,677 | 65.1% |
Molecular function | 3,477 | 48.37% |
1-Nucleic acid binding | 241 | 5.15% |
2-Protein kinase activity | 218 | 4.66% |
3-DNA binding | 208 | 4.45% |
4-Catalytic activity | 173 | 3.70% |
5-Calcium ion binding | 158 | 3.38% |
6-ATP binding | 129 | 2.76% |
7-Protein binding | 119 | 2.54% |
8-GTP binding | 114 | 2.44% |
9-Transporter activity | 96 | 2.05% |
10-Structural constituent of ribosome | 82 | 1.75% |
Biological process | 776 | 16.59% |
1-Metabolism | 122 | 2.61% |
2-Electron transport | 88 | 1.88% |
3-Intracellular signaling cascade | 54 | 1.15% |
4-Proteolysis and peptidolysis | 48 | 1.03% |
5-Protein folding | 47 | 1.00% |
6-Protein modification | 31 | 0.66% |
7-Cell adhesion | 29 | 0.62% |
8-Intracellular protein transport | 26 | 0.56% |
9-Carbohydrate metabolism | 21 | 0.45% |
10-Regulation of cell cycle | 18 | 0.38% |
Cellular component | 424 | 6% |
1-Ubiquitin ligase complex | 68 | 1.45% |
2-Integral to membrane | 58 | 1.24% |
3-Membrane | 58 | 1.24% |
4-Nucleus | 46 | 0.98% |
5-Intracellular | 41 | 0.88% |
6-Cytoplasm | 26 | 0.56% |
7-Cytoskeleton | 24 | 0.51% |
8-Nucleosome | 16 | 0.34% |
9-Chromatin | 10 | 0.21% |
10-Extracellular region | 8 | 0.17% |