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Table 3 Statistics of DGE sequencing

From: De novo characterization of Larix gmelinii (Rupr.) Rupr. transcriptome and analysis of its gene expression induced by jasmonates

Summary   CK JA MeJA
Raw Data Total 3508779 5959646 3508306
Raw Data Distinct Tag 252431 405541 302418
Clean Tag Total number 3366354 5682475 3308622
Clean Tag Distinct Tag number 114240 140268 107570
All Tag Mapping to Gene Total number 1215015 1915314 1179280
All Tag Mapping to Gene Total % of clean tag 36.09% 33.71% 35.64%
All Tag Mapping to Gene Distinct Tag number 47520 51376 38662
All Tag Mapping to Gene Distinct Tag % of clean tag 41.60% 36.63% 35.94%
Unambiguous Tag Mapping to Gene Total number 1202951 1900711 1166300
Unambiguous Tag Mapping to Gene Total % of clean tag 35.73% 33.45% 35.25%
Unambiguous Tag Mapping to Gene Distinct Tag number 47135 50986 38356
Unambiguous Tag Mapping to Gene Distinct Tag % of clean tag 41.26% 36.35% 35.66%
All Tag-mapped Genes number 19443 20411 17544
All Tag-mapped Genes % of ref genes 37.36% 39.22% 33.71%
Unambiguous Tag-mapped Genes number 19153 20114 17285
Unambiguous Tag-mapped Genes % of ref genes 36.80% 38.65% 33.21%
Unknown Tag Total number 2151339 3767161 2129342
Unknown Tag Total % of clean tag 63.91% 66.29% 64.36%
Unknown Tag Distinct Tag number 66720 88892 68908
Unknown Tag Distinct Tag % of clean tag 58.40% 63.37% 64.06%
  1. CK Control Check, JA jasmonic acid, MeJA methyl jasmonate.