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Table 2 Proportions of the 33/34-mer and the 20/26-mer motifs in various classes of CTCF loci

From: Characterization of constitutive CTCF/cohesin loci: a possible role in establishing topological domains in mammalian genomes

Motif

cCTCF/cCohesin

cCTCF-non-cohesin

All CTCF sites

33-mer

14.8%

3.8%

1.8%

34-mer

11.3%

3.8%

1.7%

20-mer

8.2%

3.7%

1.2%

26-mer

6.8%

2.1%

1.1%

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BMC Genomics

ISSN: 1471-2164

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