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Table 1 AP genes in grape

From: Genome-wide identification, evolutionary and expression analysis of the aspartic protease gene superfamily in grape

Group

Gene

Gene locus ID

Accession no.

Chromosome

Start

End

Predicted gene length(bp)

Predicted ORF length(bp)

 

VvAP1

GSVIVT01011932001

CBI27051.3

chr1

2921237

2927383

6147

771

 

VvAP2

GSVIVT01001318001

CBI31923.3

chr2

5263175

5284039

20865

2346

C

VvAP3

GSVIVT01036932001

CBI29231.3

chr2

17430558

17432766

2209

927

C

VvAP4

GSVIVT01036930001

CBI29230.3

chr2

17439361

17448268

8908

1629

 

VvAP5

GSVIVT01036013001

CBI21175.3

chr4

7189959

7192597

2639

1161

 

VvAP6

GSVIVT01036015001

CBI21177.3

chr4

7244098

7247313

3216

1131

 

VvAP7

GSVIVT01036017001

CBI21178.3

chr4

7263244

7279815

16572

1119

C

VvAP8

GSVIVT01036018001

XM_002268722

chr4

7315581

7317297

1717

1383

C

VvAP9

GSVIVT01019071001

XM_002277022

chr4

17094880

17107573

12694

1443

A1

VvAP10

GSVIVT01017701001

CBI26025.3

chr5

2775453

2778471

3019

1503

 

VvAP11

GSVIVT01017894001

CBI26188.3

chr5

4453167

4455917

2751

1203

C

VvAP12

GSVIVT01031690001

CBI39464.3

chr5

20228612

20244419

15808

1434

C

VvAP13

GSVIVT01031432001

XM_002272085

chr6

18652672

18658561

5890

1455

 

VvAP14

GSVIVT01036053001

CBI28265.3

chr6

21340808

21342747

1939

1341

 

VvAP15

GSVIVT01028308001

CBI37099.3

chr7

5960288

5965597

5309

900

C

VvAP16

GSVIVT01000170001

CBI33735.3

chr7

15840160

15846953

6793

1902

C

VvAP17

GSVIVT01022186001

CBI21469.3

chr7

17268969

17274776

5807

1593

B

VvAP18

GSVIVT01022355001

XM_002273952

chr7

18933005

18936614

3610

1281

 

VvAP19

GSVIVT01022392001

CBI21639.3

chr7

19580451

19581940

1490

837

 

VvAP20

GSVIVT01025811001

CBI32837.3

chr8

11598470

11608650

10181

1368

C

VvAP21

GSVIVT01034136001

CBI30526.3

chr8

14910379

14911704

1326

1140

 

VvAP22

GSVIVT01033940001

CBI30375.3

chr8

16541310

16569287

27978

771

 

VvAP23

GSVIVT01033937001

CBI30373.3

chr8

16581910

16588393

6484

657

C

VvAP24

GSVIVT01033935001

CBI30372.3

chr8

16595281

16597123

1843

1338

C

VvAP25

GSVIVT01033723001

XM_002263093

chr8

18335899

18342508

6610

1509

 

VvAP26

GSVIVT01016100001

CBI25263.3

chr9

18973023

18975323

2301

1080

A1

VvAP27

GSVIVT01012684001

XM_003632893

chr10

634034

638859

4826

1290

C

VvAP28

GSVIVT01026281001

CBI29076.3

chr10

15521671

15522975

1305

1305

C

VvAP29

GSVIVT01034372001

CBI35367.3

chr10

17284723

17286494

1772

1566

C

VvAP30

GSVIVT01010876001

XM_002265511

chr11

16540456

16541682

1226

1227

 

VvAP31

GSVIVT01020842001

CBI22091.3

chr12

1179799

1181100

1301

1083

C

VvAP32

GSVIVT01016510001

CBI31649.3

chr13

3269121

3294047

24927

2286

C

VvAP33

GSVIVT01036671001

CBI35120.3

chr13

20059866

20062297

2431

963

A1

VvAP34

GSVIVT01031329001

XM_002276327

chr14

327811

331186

3376

1509

A1

VvAP35

GSVIVT01031327001

CBI39668.3

chr14

337889

340868

2980

1293

C

VvAP36

GSVIVT01019297001

CBI39998.3

chr15

1765842

1766963

1122

1005

 

VvAP37

GSVIVT01027158001

CBI40559.3

chr15

17367842

17369993

2152

1311

 

VvAP38

GSVIVT01024459001

CBI26572.3

chr16

2849198

2849563

366

366

B

VvAP39

GSVIVT01008267001

CBI15437.3

chr17

3799065

3805978

6913

1422

B

VvAP40

GSVIVT01008844001

CBI18999.3

chr18

2734587

2737586

3000

1173

C

VvAP41

GSVIVT01008883001

CBI19032.3

chr18

3102029

3103369

1341

1149

C

VvAP42

GSVIVT01008978001

CBI19115.3

chr18

3994150

4000643

6494

1566

 

VvAP43

GSVIVT01009155001

CBI19249.3

chr18

5617213

5618770

1558

576

C

VvAP44

GSVIVT01009385001

XM_002283222

chr18

7918070

7925298

7229

1980

A1

VvAP45

GSVIVT01037685001

XM_002279013

chr19

6870994

6878047

7054

1545

C

VvAP46

GSVIVT01036694001

CBI24128.3

chr19

23803974

23806961

2988

1137

 

VvAP47

GSVIVT01006876001

CBI29432.3

chrUn

28781234

28782604

1371

1011

C

VvAP48

GSVIVT01006894001

XM_002269844

chrUn

28931224

28934832

3609

1557

 

VvAP49

GSVIVT01006895001

XM_003635291

chrUn

28936408

28937470

1063

450

 

VvAP50

GSVIVT01007227001

CBI25840.3

chrUn

30964385

30966631

2247

906