Table 2 Nr annotations and RPKM values of 16 selected candidate RNAi target genes in alimentary canal of grain aphid
Unigene no. | Nr-annotation | RPKM value of the unigene in Chuli | RPKM value of the unigene in Duizhao | Log 2 ratio (Chuli RPKM/Duizhao RPKM) |
|---|---|---|---|---|
Unigene_6994 | Synaptotagmin 4 [Acyrthosiphon pisum] | 54.8647 | 35.322 | 0.64 |
Unigene_ 8273 | Similar to cuticular protein CPG12 [Acyrthosiphon pisum] | 1454.892 | 641.2085 | 1.18 |
Unigene_ 8279 | Similar to CG10625 [Acyrthosiphon pisum] | 1967.559 | 554.559 | 1.83 |
Unigene_11975 | Hypothetical repeat protein [Leishmania infantum] | 17.2449 | 4.6812 | 1.88 |
Unigene_21088 | cytochrome c oxidase subunit VIIc precursor [Acyrthosiphon pisum] | 3463.178 | 7555.03 | −1.13 |
Unigene_21789 | No orthologs identified | 1987.456 | 886.7044 | 1.16 |
Unigene_23028 | Similar to zinc finger protein [Acyrthosiphon pisum] | 6.0578 | 0.0 | Only in Chuli |
Unigene_23042 | Similar to AGAP007992-PA, partial sequence [Acyrthosiphon pisum] | 6.0346 | 0.0 | Only in Chuli |
Unigene_23235 | Similar to defective proboscis extension response [Tribolium castaneum] | 5.4287 | 0.0 | Only in Chuli |
Unigene_ 26956 | No orthologs identified | 0.0 | 98.1775 | Only in Duizhao |
Unigene_ 27357 | Similar to proteophosphoglycan ppg1 [Acyrthosiphon pisum] | 1481.846 | 525.2179 | 1.49 |
Unigene_ 27882 | Similar to neurofilament, heavy polypeptide isoform 2 [Acyrthosiphon pisum] | 1602.747 | 751.6207 | 1.09 |
Unigene_ 28447 | No orthologs identified | 1861.09 | 494.6134 | 1.91 |
Unigene_28469 | No orthologs identified | 2775.923 | 174.3591 | 3.99 |
Unigene_ 28555 | ACYPI002010 [Acyrthosiphon pisum] | 2321.885 | 681.4342 | 1.76 |
Unigene_ 29698 | No orthologs identified | 0.0 | 98.4885 | Only in Duizhao |