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Table 4 Assembly genes implicated in ginsenosides biosynthesis

From: The root transcriptome for North American ginseng assembled and profiled across seasonal development

Gene Alias EC KO Annotation
Pq9090 AACT 2.3.1.9 K00626 Acetyl-CoA acetyltransferase
Pq24050 HMGS 2.3.3.10 K01641 HMG-CoA synthase
Pq28460 HMGR 1.1.1.34 K00021 HMG-CoA reductase (NADPH)
Pq48060 MK 2.7.1.36 K00869 Mevalonate kinase
Pq106070 PMK 2.7.4.2 K00938 Phosphomevalonate kinase, mvaK2
Pq40790 MDD 4.1.1.33 K01597 Mevalonate diphosphate decarboxylase
Pq10790 IDI 5.3.3.2 K01823 Isopentenyl-diphosphate-isomerase
Pq57960 FPS/DMAPP 2.5.1.1 K14066 Farnesyl diphosphate synthase/IPP-dimethylallyltransferase
Pq25790 FPS/DMAPP 2.5.1.1.1/10 K00787 Farnesyl diphosphate synthase/IPP-dimethylallyltransferase
Pq130580 FPS/DMAPP 2.5.1.1.1/10 K13789 Farnesyl diphosphate synthase/IPP-dimethylallyltransferase
Pq44950 FPS/DMAPP 2.5.1.1.1/10 K13789 Farnesyl diphosphate synthase/IPP-dimethylallyltransferase
Pq28280 SQS 2.5.1.21 K00801 Squalene synthase
Pq129610 SQE1 1.14.13.132 K00511 Squalene epoxidase 1
Pq7190 SQE1 1.14.13.132 K00511 Squalene epoxidase 1
Pq41740 DS 4.2.1.125 K15817 Dammarenediol-II synthase
Pq137240 AS    β-amyrin synthase
Pq133900 AS    β-amyrin synthase
Pq215750 AS    β-amyrin synthase
Pq104900 AS    β-amyrin synthase
Pq194830 AS    β-amyrin synthase
Pq75200 P450    Cytochrome P450, CYP73A5
Pq7360 P450    Cytochrome P450, CYP71B25
Pq9780 P450    Cytochrome P450, CYP75B1
Pq10460 P450    Cytochrome P450, CYP71A26
Pq142430 P450    Cytochrome P450
Pq108220 P450    Cytochrome P450, CYP710A1
Pq137680 GT    UDP-Glycosyltransferase
Pq47050 GT    Glycosyltransferase, GAUT9
Pq177130 GT    Glycosyltransferase, GAUT14
Pq117050 GT    UDP-Glycosyltransferase
Pq158770 GT    α 1,4-Glycosyltransferase
Pq10160 GT    UDP-Glycosyltransferase, 71C4
Pq315* GT    UDP-Glycosyltransferase
  1. * This gene possessed 96 splice variants and may be an artefact of assembly.