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Table 6 Functions associated with Eutrema genes differentially expressed according to accession or location

From: RNA-Seq effectively monitors gene expression in Eutrema salsugineum plants growing in an extreme natural habitat and in controlled growth cabinet conditions

Shandong cabinet vs. Yukon cabinet

Yukon field vs. Yukon cabinet

GO term

GO ID

Q value

GO term

GO ID

Q value

Defense response

0006952

1.67 × 10-13

Photosynthesis

0015979

8.58 × 10-23

Response to stress

0006950

6.33 × 10-10

Metabolic process

0008152

1.33 × 10-15

   

Oxidation-reduction process

0055114

1.37 × 10-13

   

Response to stimulus

0050986

1.37 × 10-13

   

Photosynthesis-light reactions

0019684

3.73 × 10-12

   

Response to abiotic stimulus

0009628

1.33 × 10-11

   

Response to biotic stimulus

0009607

2.73 × 10-11

   

Response to other organism

0051707

6.17 × 10-11

   

Response to stress

0006950

6.95 × 10-11

   

Response to bacterium

0009617

2.34 × 10-10

  1. GO terms that are significantly enriched are presented. Q values show the level of significance for each comparison within the indicated plant groups.