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Table 1 Whole genome prediction counts

From: Predicting whole genome protein interaction networks from primary sequence data in model and non-model organisms using ENTS

Training

Prediction

0.55

0.65

0.75

0.85

S. cerevisiae

S. cerevisiae

29,616 (4,320)

10,933 (3,314)

2,841 (1,713)

497 (576)

H. sapiens

H. sapiens

212,365 (12,936)

94,082 (9,906)

29,562 (6,377)

4,180 (2,223)

M. musculus

244,548 (13,615)

98,108 (10,157)

26,860 (5,889)

2,825 (1,496)

A. thaliana

A. thaliana

346,020 (15,964)

176,600 (13,426)

79,796 (9,504)

19,915 (4,010)

P. trichocarpa

481,253 (19,321)

178,232 (14,536)

42,503 (7,501)

4,085 (1,316)

  1. Protein-protein interactions predicted using ENTS at several confidence cutoffs. The number of genes involved in the predicted interactions is shown in parentheses.