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Table 3 Hypothetical cultivar-specific genes based upon the reciprocal blast

From: Transcriptome analysis of two buffalograss cultivars

Transcript Transcript Average read Description
  length (bp) numbers  
Prestige
preC_247169 647 206.0 dna repair and recombination protein
preC_214648 316 61.5 maize proteinase inhibitor
preC_236041 545 54.0 copper transporter 1
preC_262069 551 33.3 proteasome assembly chaperone 2
preC_256520 237 28.2 e-cadherin binding protein
preC_167144 650 23.7 cle family 306 protein
preC_256357 190 21.2 zinc finger family expressed
preC_128843 234 15.2 pentatricopeptide repeat-containing protein
preC_231580 353 14.8 s-receptor kinase
preC_169805 381 13.5 protein epidermal patterning factor 2-like
378
378C_71451 258 278.7 snare-like protein
378C_151851 237 108.5 tubulin-specific chaperone d-like
378C_238144 303 84.2 subtilisin-like protease
378C_152448 174 70.7 lin1 protein
378C_199252 175 51.8 craniofacial development protein 1-like
378C_223520 325 47.0 pollen-specific protein like
378C_24916 192 18.5 trab domain-containing
378C_235655 173 16.8 nicotinate-nucleotide pyrophosphorylase
378C_202598 275 15.3 growth-regulating factor 2
378C_135613 214 10.2 serine threonine-protein kinase ctr1-like
  1. Listed are the top 10 most highly expressed from each cultivar with the removal of sequences of vague descriptions. Average expression is a measure of reads mapped per sample.