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Table 3 Hypothetical cultivar-specific genes based upon the reciprocal blast
| Transcript | Transcript | Average read | Description |
|---|---|---|---|
| length (bp) | numbers | ||
| Prestige | |||
| preC_247169 | 647 | 206.0 | dna repair and recombination protein |
| preC_214648 | 316 | 61.5 | maize proteinase inhibitor |
| preC_236041 | 545 | 54.0 | copper transporter 1 |
| preC_262069 | 551 | 33.3 | proteasome assembly chaperone 2 |
| preC_256520 | 237 | 28.2 | e-cadherin binding protein |
| preC_167144 | 650 | 23.7 | cle family 306 protein |
| preC_256357 | 190 | 21.2 | zinc finger family expressed |
| preC_128843 | 234 | 15.2 | pentatricopeptide repeat-containing protein |
| preC_231580 | 353 | 14.8 | s-receptor kinase |
| preC_169805 | 381 | 13.5 | protein epidermal patterning factor 2-like |
| 378 | |||
| 378C_71451 | 258 | 278.7 | snare-like protein |
| 378C_151851 | 237 | 108.5 | tubulin-specific chaperone d-like |
| 378C_238144 | 303 | 84.2 | subtilisin-like protease |
| 378C_152448 | 174 | 70.7 | lin1 protein |
| 378C_199252 | 175 | 51.8 | craniofacial development protein 1-like |
| 378C_223520 | 325 | 47.0 | pollen-specific protein like |
| 378C_24916 | 192 | 18.5 | trab domain-containing |
| 378C_235655 | 173 | 16.8 | nicotinate-nucleotide pyrophosphorylase |
| 378C_202598 | 275 | 15.3 | growth-regulating factor 2 |
| 378C_135613 | 214 | 10.2 | serine threonine-protein kinase ctr1-like |
