Skip to main content

Table 1 Summary of sequenced reads throughout a soybean- P. pachyrhizi infection study

From: Analysis of Phakopsora pachyrhizi transcript abundance in critical pathways at four time-points during infection of a susceptible soybean cultivar using deep sequencing

Time-points SRA accession # Raw reads # QA/QCareads after all filtering # De-novo transcripts
15 sai SRR445529 4,467,871 1,220,368 6531
7 hai SRR610280 7,543,421 2,997,508 4627
48 hai SRR610284 9,082,363 2,124,743 4273
10 dai SRR445528 3,510,311 1,947,057 12284
  1. aQuality Assurance/Quality Control.