Analysis of Phakopsora pachyrhizi transcript abundance in critical pathways at four time-points during infection of a susceptible soybean cultivar using deep sequencing

Table 1 Summary of sequenced reads throughout a soybean- P. pachyrhizi infection study

Time-points	SRA accession	# Raw reads	# QA/QC^areads after all filtering	# De-novo transcripts
15 sai	SRR445529	4,467,871	1,220,368	6531
7 hai	SRR610280	7,543,421	2,997,508	4627
48 hai	SRR610284	9,082,363	2,124,743	4273
10 dai	SRR445528	3,510,311	1,947,057	12284

ISSN: 1471-2164