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Table 2 Contigs of importance, shorter than 75 bp, taking into account in our analysis

From: Analysis of Phakopsora pachyrhizi transcript abundance in critical pathways at four time-points during infection of a susceptible soybean cultivar using deep sequencing

Contig length Similarity search results E.C. number k-mer coverage Normalized coverage
70 bp NADH dehydrogenase subunit f 1.6.5.3 1.54 2.450
62 bp Fructose-1,6-bisphosphatase 3.1.3.11 1.62 2.790
72 bp Pectin methylesterase 1 N.A.a 1.58 2.473
69 bp Penicillin amidase 3.5.1.11 1.71 2.744
64 bp Polyphosphate kinase 2.7.4.1 1.26 2.122
59 bp Xanthine dehydrogenase 1.17.1.4 1.35 2.414
50 bp Gamma-glutamyl phosphate reductase N.A. 1.78 3.708
55 bp Methylenetetrahydrofolate reductase N.A. 1.72 3.262
73 bp Pyrophosphate-dependent phosphofructokinase 2.7.1.11 1.56 2.423
52 bp Urease 3.5.1.5 1.09 2.180
68 bp Glucokinase 2.7.1.2 1.47 2.380
58 bp Malate dehydrogenase 1.1.1.37 1.96 3.553
59 bp Phosphoribosylformylglycinamidine cyclo-ligase 6.3.3.1 1.52 2.718
54 bp Phosphoribosylaminoimidazole carboxylase 4.1.1.21 2.14 4.127
56 bp Pyruvate dehydrogenase (acetyl-transferring) 1.2.4.1 1.57 2.931
51 bp 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 5.4.2.1 1.11 2.264
65 bp NAD-specific glutamate dehydrogenase 1.4.1.2 1.81 3.017
  1. aNot applicable since no E.C. number has been allocated to these proteins.