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Table 1 Distribution of SSR’s by species

From: FishMicrosat: a microsatellite database of commercially important fishes and shellfishes of the Indian subcontinent

S no. Species Simple Compound
Sequences Mono Di Tri Tetra Penta Hexa
1 Amphiprion sebae 1 0 1 0 0 0 0 0
2 Catla catla 22 1 25 1 4 0 0 0
3 Channa marulius 2 0 2 0 0 0 0 0
4 Chitala chitala 31 0 31 1 6 0 0 4
5 Cirrhinus cirrhosus 7 0 6 0 0 0 0 0
6 Cirrhinus mrigala 11 0 9 1 1 0 0 0
7 Ctenopharyngodon idella 500 18 523 29 70 0 0 31
8 Epinephelus fuscoguttatus 312 43 167 29 11 2 0 5
9 Fenneropenaeus indicus 182 11 96 26 86 1 0 18
10 Garra gotyla 26 2 13 0 0 0 0 1
11 Heteropneustes fossilis 10 5 11 0 0 0 0 0
12 Hippocampus kuda 12 1 10 1 2 0 0 0
13 Hippocampus trimaculatus 12 1 12 1 2 0 0 0
14 Horabagrus brachysoma 11 0 12 2 0 0 0 0
15 Hypophthalmichthys molitrix 402 42 425 18 59 1 0 27
16 Hypselobarbus curmuca 8 1 7 2 1 0 0 0
17 Katsuwonus pelamis 5 1 7 1 0 0 0 0
18 Labeo bata 4 0 4 0 0 0 0 0
19 Labeo calbasu 10 0 8 0 1 0 0 1
20 Labeo dussumieri 7 0 2 2 1 0 0 1
21 Labeo dyocheilus 10 0 6 0 1 0 0 1
22 Labeo fimbriatus 17 1 28 0 0 0 0 0
23 Labeo pangusia 11 0 10 0 0 0 0 1
24 Labeo rohita 531 9 689 169 38 0 5 26
25 Lates calcarifer 975 43 903 53 157 8 0 51
26 Macrobrachium malcolmsonii 5 0 5 0 0 0 0 2
27 Macrobrachium rosenbergii 180 20 151 106 3 0 0 16
28 Mystus oculatus 2 0 1 0 0 0 0 1
29 Mystus tengara 1 0 1 0 0 0 0 0
30 Notopterus notopterus 8 0 13 0 1 0 0 0
31 Oreochromis niloticus 303 14 399 7 2 0 0 11
32 Osteobrama belangeri 3 0 2 0 0 0 0 0
33 Pampus argenteus 31 3 45 0 3 0 0 2
34 Pangasius pangasius 28 1 37 2 0 0 0 1
35 Penaeus monodon 618 59 366 155 104 3 6 68
36 Puntius chalakkudiensis 11 0 21 1 0 0 0 1
37 Puntius denisonii 11 0 17 0 0 0 0 0
38 Rita gogra 2 0 3 0 0 0 0 0
39 Schizothorax richardsonii 53 1 119 3 0 0 0 7
40 Sinilabeo dero 20 0 15 0 1 0 0 3
41 Sperata aor 3 0 5 0 0 0 0 0
Total 41 4398 277 4207 610 554 15 11 279