Skip to main content

Table 5 DAVID analysis of allele-specific expression (ASE) genes in response to Marek’s disease virus (MDV) infection (P<0.05) in broilers and layers

From: Comparison and contrast of genes and biological pathways responding to Marek’s disease virus infection using allele-specific expression and differential expression in broiler and layer chickens

Category

Term

Count

%

P-Value

A. Broilers

KEGG_PATHWAY

Nucleotide excision repair

13

0.6

2.30E-03

KEGG_PATHWAY

DNA replication

10

0.5

1.70E-02

KEGG_PATHWAY

Fatty acid metabolism

10

0.5

2.90E-02

KEGG_PATHWAY

Apoptosis

19

0.9

3.10E-02

KEGG_PATHWAY

Ribosome

19

0.9

3.10E-02

KEGG_PATHWAY

Lysosome

23

1.1

3.50E-02

KEGG_PATHWAY

Basal transcription factors

9

0.4

3.90E-02

KEGG_PATHWAY

p53 signaling pathway

15

0.7

5.50E-02

KEGG_PATHWAY

Base excision repair

8

0.4

6.60E-02

KEGG_PATHWAY

Pyrimidine metabolism

19

0.9

8.30E-02

KEGG_PATHWAY

Amino sugar and nucleotide sugar metabolism

10

0.5

9.40E-02

KEGG_PATHWAY

Mismatch repair

6

0.3

9.60E-02

KEGG_PATHWAY

Propanoate metabolism

8

0.4

9.90E-02

B. Layers

KEGG_PATHWAY

Focal adhesion

27

2.2

3.40E-03

KEGG_PATHWAY

Lysine degradation

8

0.7

2.40E-02

KEGG_PATHWAY

Propanoate metabolism

6

0.5

6.40E-02

KEGG_PATHWAY

DNA replication

6

0.5

7.40E-02

KEGG_PATHWAY

Amino sugar and nucleotide sugar metabolism

7

0.6

7.80E-02

KEGG_PATHWAY

Apoptosis

11

0.9

9.20E-02