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Table 2 Assembly and gene statistics of E. tarda genomes

From: Comparative genomics reveals that a fish pathogenic bacterium Edwardsiella tarda has acquired the locus of enterocyte effacement (LEE) through horizontal gene transfer

Strain

Contig

Total size (bp)

Mean contig size (bp)

Longest contig size (bp)

N50 (bp)

GC%

Protein-coding genes

Known genes

This study

        

NUF806

59

3,751,597

63,586

339,184

257,179

59.77

3,590

3,517

E22

77

3,962,523

51,461

361,787

254,731

59.35

3,868

3,759

FPC503

97

3,952,758

40,750

277,956

191,777

59.11

3,882

3,562

SU100

71

3,628,706

51,108

682,159

340,928

57.26

3,404

3,277

SU117

98

3,632,832

37,069

372,253

222,307

57.33

3,425

3,258

SU138

172

3,761,148

21,867

527,925

232,606

57.32

3,499

3,337

SU244

134

3,745,746

27,953

665,778

222,315

57.18

3,528

3,357

ATCC23685

123

3,655,430

29,718

608,143

256,355

57.24

3,434

3,343

Public data

        

EIB202

1

3,760,463

   

59.73

3,588

 

FL6-60

1

3,684,607

   

59.81

3,256

 

ATCC23685

87

3,744,568

43,041

2,378,503

 

57.16

3,964

 

E. ictaluri 93-146

1

3,812,315

   

57.44

3,784

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