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Table 2 Different assembly steps involved in the transcriptomic study of horse gram

From: Comprehensive transcriptomic study on horse gram (Macrotyloma uniflorum): De novo assembly, functional characterization and comparative analysis in relation to drought stress

Assembly steps

Total transcripts

Number of transcripts (≥1000 bp)

Percent of transcripts (≥1000 bp)

Maximum transcript length (bp)

Average transcript length (bp)

N 50 value (bp)

Coverage (X)

Primary assembly step

62, 065

28, 110

45.29

15, 501

1, 114.72

1, 728

295

Hierarchical clustering

29, 603

14, 855

50.18

15, 764

1, 221.20

1, 770

568

Total Unique Gene groups

21, 887

12, 706

58.05

15, 764

1, 364.09

1, 805

667

  1. All the steps performed for the de novo assembly of horse gram and calculation of different statistics for each step.
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BMC Genomics

ISSN: 1471-2164

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