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Table 2 Transposable elements (TE)/repeat contents of the deleted regions on each rice chromosome

From: Genome-wide copy number variations in Oryza sativa L.

Chr

No. of deleted regions

Size (bp)

Total TEs/repeat contents (bp)

Repeats (%)

1

208

676,382

11,9739

17.7

2

123

419,802

94,567

22.5

3

83

236,013

42,199

17.9

4

276

932,484

262,945

28.2

5

89

278,236

76,429

27.5

6

208

689,705

166,491

24.1

7

191

662,018

150,876

22.8

8

220

680,049

165,148

24.3

9

209

708,361

161,137

22.8

10

174

547,441

160,026

29.2

11

457

1,674,344

326,289

19.5

12

319

1,107,862

266,045

24.0