Skip to main content

Table 5 Predicted novel miRNA in Musa A- and Musa B-genomes

From: “A draft Musa balbisiana genome sequence for molecular genetics in polyploid, inter- and intra-specific Musa hybrids”

miRNA family

Locus A-genome

Locus B = genome

Mature_miRNA sequence 5′ – 3′

mba-miR1

 

chr11: 8494985..8495047

AGAAACUUUUGUUGGAGAGGAAC

mac-miR2 mba-miR2

chr5:6134793..6134884

chr5: 5463327..5463417

CCGCAGGAGAGAUGAUGCCGCU

mba-miR3

 

chrUn_random:810706..810748

UACCGUACUGUACCGGCGUUU

mba-miR4

 

chr10: 20915746..20915798

CCUGAUUUGCUAAGUAGAUUU

mba-miR5

 

chr7: 16539311..16539413

UGGUUGAUGACGAUGUCGGCC

mac-miR6 mba-miR6

chr7:1377251..1377323

chr7: 1254647..1254718

UAGGAGAGAUGACACCGGCU

mac-miR7 mba-miR7

chr1:10560884..10561005

chr1: 9229340..9229458

AAACUAGUGCUAAGACCCAAUCUC

mba-miR8

 

chr1: 10667301..10667378

GGUGGUCUGGAUGAGGAUGCC

mac-miR9 mba-miR9

chr7:4569849..4569909

chr7: 4219274..4219333

UGGCUGAUGAUGAGUGAUCUU

mba-miR10

 

chr8: 20785187..20785267

CUUUGGCUUCUGGGUAGACGUA

mba-miR11

 

chr9: 8635028..8635089

UGUACGGAUAUGGUAGAGGGGCGU

mba-miR12

 

chr4: 17987962..17988016

AUCCCCGAGUGGGGUCGGUCGGAC

mba-miR13

 

chr8: 23338135..23338275

CUCGAGAUAUAUGAGUGUGGACA

mba-miR14

 

chrUn_random: 21488242..21488315

GGCACCUCGAUGUCGGCUC

mba-miR15

 

chr9: 25179371…25179434

GAGGAGGAGAAGAAAUGGAUCUG

mba-miR16

 

chr6: 3503608..3503675

GAAGAGGAAGGAGAAGUCG

mba-miR17

 

chr1: 17563902..17563986

CAGAAGUAGAAUACAUAAC

mba-miR18

 

chrUn_random: 135937842..135937988

UCCUUUUAGACCGUUGACGA

mac-miR19

chr4:22573796..22573893

 

UCCAGGAGAGAUGACACCAAC

mac-miR20

chr1:4998969..4999025

 

GGCGAUGAUGAUUGGUGAAUGU

mac-miR21

chrUn_random:15968301..15968390

 

GGAGAGAUGGCUGAGUGGACUAAA

mac-miR22

chrUn_random:23270434..23270480

 

CGAGGUGUAGCGCAGUCUGG

mac-miR23

chr8:31825102..31825180

 

UGGGAAGAAGACAAGGACAACAUG

mac-miR24

chr6:8249043..8249103

 

GAUCUCUGACCGAGCGGACUCC

mac-miR25

chr4:345377..345475

 

CAACGAUGAUGAGCCUACUAGACC

mac-miR26

chr11:15733314..15733359

 

AGAUGAGGUAAAGUAGUGCGA

mac-miR27

chr6:9168756..9168839

 

CAGCGACCUAAGGAUAACU

mac-miR28

chr7:28606179..28606234

 

GCGGAUGUGGCCAAGUGGU