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Table 7 overview of RNA-transcript read coverage distribution per chromosome following mapping to the combined A- and B-genomes

From: “A draft Musa balbisiana genome sequence for molecular genetics in polyploid, inter- and intra-specific Musa hybrids”

Sequence Name Reference length/bp Normalised mapped transcripts count
   CDS Unigenes Ygi GM Mbk Btd Iho Karat
A_chr1 27,573,629 76.5 75.7 79.1 71.4 54.6 52.9 54.9 47.0
A_chr2 22,054,697 63.7 59.4 57.4 53.5 40.9 40.5 39.7 30.0
A_chr3 30,470,407 89.6 85.6 90.7 81.6 62.8 60.7 61.9 50.1
A_chr4 30,051,516 92.5 90.0 88.6 81.9 63.1 61.7 57.8 45.3
A_chr5 29,377,369 81.6 75.6 76.9 69.7 53.9 56.3 53.3 42.4
A_chr6 34,899,179 100.7 103.2 102.2 92.0 73.1 70.4 71.0 54.8
A_chr7 28,617,404 75.6 75.1 74.9 68.7 24.5 25.3 49.8 37.8
A_chr8 35,439,739 94.1 90.3 98.8 86.5 69.4 68.0 68.7 51.8
A_chr9 34,148,863 84.6 79.3 80.6 76.2 60.0 57.3 64.2 43.6
A_chr10 33,665,772 86.6 88.2 83.9 75.9 68.7 67.9 60.5 42.7
A_chr11 25,514,024 73.1 67.1 70.0 64.6 49.0 47.3 50.9 34.7
A_chrUn_random 141,147,818 79.7 51.6 58.1 51.3 37.7 37.8 50.4 31.7
B_chr1 22,038,404 0.3 4.4 3.1 10.4 29.6 32.1 32.7 42.1
B_chr2 17,349,238 0.1 3.8 2.3 7.6 22.4 24.1 23.2 29.6
B_chr3 24,161,952 0.3 4.8 3.7 11.8 33.5 35.4 34.4 47.6
B_chr4 24,656,528 0.1 4.9 3.5 11.1 28.5 29.2 35.1 43.4
B_chr5 23,648,591 0.1 5.2 3.0 10.6 27.2 28.0 29.7 41.7
B_chr6 27,831,592 0.2 5.9 4.4 13.9 36.4 36.2 36.1 47.6
B_chr7 22,212,853 0.1 5.9 3.9 10.2 61.5 59.6 28.8 39.2
B_chr8 27,665,716 0.1 6.6 2.8 12.2 25.6 26.3 24.6 46.3
B_chr9 25,900,723 0.1 5.9 3.8 10.8 21.8 23.0 4.7 41.4
B_chr10 25,230,959 0.1 4.1 3.8 11.6 10.0 10.8 22.2 43.5
B_chr11 20,721,546 0.1 4.8 2.5 9.0 24.3 26.9 26.5 35.6
B_chrUn_random 141,147,818 0.2 2.7 2.1 7.6 21.6 22.1 18.9 30.2
% A 54.0 99.8 94.1 96.1 87.3 65.8 64.6 68.3 51.2
% B 46.0 0.2 5.9 3.9 12.7 34.2 35.4 31.7 48.8
  1. Read counts normalised per million total reads to allow direct comparison between cultivars. CDSm ‘Pahang’, AA variety CDS reference set; Unigenes’, EST set derived from AAA cultivar ‘Grande Naine’; Ygi, AAA cultivar ‘Yangambi-km5’; GM, AAA cultivar ‘Gros Michel’; Mbk-3, AAB cultivar ‘Mbouroukou-3’; Btd, AAB cultivar ‘Batard’; Iho, AAB cultivar ‘Iholena lele’; Karat, diploid Fe’i cultivar ‘Karat’.