Table 1 Confirmation of known human germline differentially methylated regions
Gene | Germline DMR locus* | Overlapping UCSC CpG island* | Average methylation | Reference |
|---|---|---|---|---|
HYMAI/PLAGL1 | chr6:144323557-144324495 | chr6:144328917-144329847 | 0.384 | [42] |
IGF2R** | chr6:160426265-160427502 | chr6:160426265-160427502 | 0.698 | [43] |
GRB10 | chr7:50849753-50850871 | chr7:50849753-50850871 | 0.452 | [44] |
SGCE/PEG10 | chr7:94284859-94286527 | chr7:94284859-94286527 | 0.390 | [45] |
MEST | chr7:130130740-130133111 | chr7:130130740-130133111 | 0.499 | [46] |
H19/IGF2 | chr11:2020180-2022580 | chr11:2019566-2019863 | 0.457 | [47] |
KCNQ1 | chr11:2720354-2721827 | chr11:2720411-2722087 | 0.504 | [48] |
MEG3 | chr14:101272662-101277765 | chr14:101290524-101290868 | 0.334 | [49] |
SNRPN | chr15:25,199,933-25200342 | chr15:25200036-25201054 | 0.374 | [50] |
PEG3 | chr19:57351284-57351995 | chr19:57351284-57351995 | 0.420 | [51] |
NNAT | chr20:36148604-36150136 | chr20:36148604-36150136 | Not represented | [52] |
L3MBTL | chr20:42143211-42143591 | chr20:42143211-42143591 | 0.479 | [53] |
GNAS-A | chr20:57464132-57464622 | chr20:57463653-57467739 | 0.191 | [54] |
GNAS-B | chr20:57426198-57430959 | chr20:57426730-57427047 | 0.494 | [55] |
RB1 | chr13:48892636–48893857 | chr13:48892636-48893857 | 0.577 | [56] |
INPP5F_V2 | chr10:121577530-121578385 | chr10:121577530-121578385 | 0.456 | [57] |
MCTS2 | chr20:30135077-30135292 | chr20:30135077-30135292 | 0.633 | [57] |