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Table 1 Borrelia isolates analyzed in this study

From: Inter- and intra-specific pan-genomes of Borrelia burgdorferi sensu lato: genome stability and adaptive radiation

Species

Strain

rRNA IGS lineage

ospC type

Genome status

No. of plasmids

GPIDa

Isolation and sequence references

B. burgdorferi

B31

1

A

Complete

21

3

[57, 86, 112]

Bol26

3

S

Draft

13

19837

[34, 50]

ZS7

16

Bb

Draft

14

19839

[50, 113]

64b

3

Ba

Draft

18

28633

[50, 114]

297

2

K

Completeb

20

39123

[50, 115]

156a

12

Hb

Complete

20

19835

[50, 114]

WI-91-23

7

Ia

Draft

21

28627

[50, 116]

94a

8

U

Draft

14

20999

[50, 114]

JD1

24

C

Complete

20

39121

[50, 117]

CA-11.2A

19

Dd

Draft

12

28629

[50, 118]

118a

20

J

Draft

19

21001

[50, 114]

N40

9

E

Complete

17

39119

[50, 119]

72a

26

G

Draft

13

21003

[50, 114]

29805

6

M

Draft

15

28621

[50, 120]

B. “finlandensis

SV1

---

---

Draft

10

28631

[34, 53]

B. valaisiana

VS116

---

---

Draft

11

19843

[52, 121]

B. bissettii

DN127

---

---

Complete

16

29363

[52, 122]

B. afzelii

PKo

---

---

Complete

17

68149, 17057

[51, 54, 123]

ACA-1

---

---

Draft

14

19841

[51, 124]

B. garinii

PBr

---

---

Draft

12

28625

[51, 123]

Far04

---

---

Draft

7

29573

[51, 125]

B. “bavariensis

PBi

---

---

Incomplete

(11)c

58125

[14, 48, 126]

B. spielmanii

A14S

---

---

Draft

13

28635

[52, 127]

  1. aGenome Project ID. Data from each genome can be retrieved directly from the NCBI Entrez Genome Project Database (http://www.ncbi.nlm.nih.gov/bioproject) using the Genbank Genome Project ID.
  2. bFor B. burgdorferi strain 297, all the plasmids have been identified and sequenced to closure. However, the chromosome of 297 was not sequenced.
  3. cThe complete sequences for all strain PBi plasmids have not yet been reported.