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Table 3 B . burgdorferi chromosomal groups

From: Inter- and intra-specific pan-genomes of Borrelia burgdorferi sensu lato: genome stability and adaptive radiation

Typing Method a

1

2

3

4

5

6

7

8

Strain

B31

1

1

1

1

1

1

1/2

A

64b

3b

1

1

1

1

1

1/2

A

Bol26

1

3

1

1

1

1/2

A

ZS7

1

1

3

1

1

1

1/2

A

156a

2

2

2

2

2

2a

2/1

D

297

2

2

2

2

2b

Dc

JD1

5

1

6

3

2

2c

2/1

D

72a

4

2

4

3

3

3a

1/1

C

94a

8b

3

4

3

3

3a

1/1

C

118a

5

2

4

3

3

3b

1/1

C

CA-11.2A

5

2

2

3

3

3a

1/–

C

N40

9

3

5

3

4

4

2/2

B

WI91-23

7

2

4

3

5

4

2/1

B

29805

6

3

7

3

6

4

1/1

B

  1. a. Chromosomal typing methods are as follows:
  2. 1. Ribosomal rRNA spacer IGS 1 [35, 37].
  3. 2. Arbitrary MLST group name [33, 38].
  4. 3. Arbitrary MLST group name (Figure 1 this report).
  5. 4. RST type deduced from our sequences [67, 68].
  6. 5. Plasmid content similarity, arbitrary group name (S. Casjens, unpublished).
  7. 6. Chromosomal right end organization, arbitrary group name (S. Casjens, unpublished).
  8. 7. Two chromosomal indels: 157 bp in gene 0021 and 27–30 bp between genes 0001 and 0002 (1 = no deletion; 2= deletion).
  9. 8. Chromosomal, cp26 and lp54 SNP type, this report.
  10. - not determined.
  11. b. IGS 1 lineages 1 and 3 form a coherent superlineage, and IGS 1 8 is a rather close relative of lineage IGS 1 5 [35].
  12. c. 297 chromosomal SNP type not determined.