Table 3 Main characteristics of the new ISs identified using de novo methods
Host | IS name | Family | Copy number C P | ISFinder similarity | DR | IR |
|---|---|---|---|---|---|---|
M. hungateii | ISCNY (?) | 9 3 | 10e-12 ISPlu15 | 0 | 0 | |
A. pernix | ? | 8 2 | - | 0 | 0 | |
S. tokodaii | IS200/605 | 4 0 | 10e-20 ISBce3 | 0 | 0 | |
F. acidarmanus | ? | 4 0 | - | 6 | 27 | |
F. acidarmanus | IS200/605 | 4 0 | 6e-36 ISDge19 | 0 | 0 | |
F. acidarmanus | ? | 6 1 | - | 9 | 17 | |
F. acidarmanus | IS3 | 4 1 | 5e-29 ISBce13 | 0 | 16 | |
F. acidarmanus | IS4 (?) | 3 0 | 5e-9 ISMbov2 | 0 | 34 | |
T. volcanium | IS200/605 | 5 0 | 5e-18 ISTsib1 | 0 | 0 | |
M. acetivorans | ? | 13 6 | - | 0 | 24 | |
M. acetivorans | ? | 2 1 | - | 0 | 16 | |
M. acetivorans | ? | 2 0 | - | 0 | 21 | |
M. acetivorans | ? | 5 0 | - | 0 | 19 | |
N. pharaonis | IS200/605 | 3 0 | 8e-35 ISClte2 | 0 | 10 | |
T. kodakarensis | ? | 2 1 | - | 0 | 14 |