Table 1 miRNAs and their target genes localization on the interspecific BC 1 linkage map
miRNAs name | Chromosome | Subgenome | Genetic map | Target name | Chromosome | Subgenome | Genetic map |
|---|---|---|---|---|---|---|---|
distance (cM) | distance (cM) | ||||||
miR156c-DX535560★ | Chr23 | D | 154.258 | T-TC29212 | Chr11 | A | 112.712 |
T-CO079328 | Chr21 | D | 56.729 | ||||
T-TC37339 | Chr21 | D | 220.676 | ||||
miR156c-DX535560★ | Chr23 | D | 154.258 | T-TC35884▲ | Chr11 | A | 214.024 |
T-TC36356â–² | Chr15 | D | 118.218 | ||||
miR157b-CO076888★ | Chr23 | D | 150.354 | T-TC35884▲ | Chr11 | A | 214.024 |
T-TC36356â–² | Chr15 | D | 118.218 | ||||
miR159-Me29 | Chr05 | A | 165.2 | T-TC32762 | Chr11 | A | 94.707 |
miR159-Me24 | Chr12 | A | 156.471 | T-TC32762 | Chr11 | A | 94.707 |
miR164-Me4a★ | Chr11 | A | 146.281 | T-TC41649 | Chr05 | A | 70.705 |
miR164-Me4b★ | Chr20 | D | 26.305 | T-TC41649 | Chr05 | A | 70.705 |
T-CO108738 | Chr09 | A | 124.811 | ||||
miR164-Me12★ | Chr14 | D | 157.964 | T-TC41649 | Chr05 | A | 70.705 |
T-CO108738 | Chr09 | A | 124.811 | ||||
miR164-Me29★ | Chr17 | D | 79.157 | T-TC41649 | Chr05 | A | 70.705 |
T-CO108738 | Chr09 | A | 124.811 | ||||
miR164-Me40★ | Chr13 | A | 91.878 | T-TC41649 | Chr05 | A | 70.705 |
T-CO108738 | Chr09 | A | 124.811 | ||||
miR164-Em33★ | Chr17 | D | 82.728 | T-TC41649 | Chr05 | A | 70.705 |
T-CO108738 | Chr09 | A | 124.811 | ||||
miR164-Em20★ | Chr26 | D | 143.941 | T-TC41649 | Chr05 | A | 70.705 |
T-CO108738 | Chr09 | A | 124.811 | ||||
miR167-Me7★ | Chr25 | D | 126.296 | T-TC31104 | Chr12 | A | 169.342 |
T-TC38767 | Chr23 | D | 25.125 | ||||
miR167-Me49a★ | Chr03 | A | 67.893 | T-TC31104 | Chr12 | A | 169.342 |
T-TC38767 | Chr23 | D | 25.125 | ||||
miR167-Me49b★ | Chr05 | A | 198.84 | T-TC31104 | Chr12 | A | 169.342 |
T-TC38767 | Chr23 | D | 25.125 | ||||
miR169a-Me27 | Chr19 | D | 18.195 | T-TC29763â–² | Chr13 | A | 153.525 |
miR169a-Em5 | Chr18 | D | 84.73 | T-TC29763â–² | Chr13 | A | 153.525 |
miR169a-Em10 | Chr03 | A | 75.625 | T-TC29763â–² | Chr13 | A | 153.525 |
miR169a-Em12 | Chr15 | D | 134.58 | T-TC29763â–² | Chr13 | A | 153.525 |
miR169b-Me45 | Chr05 | A | 131.477 | T-TC29763â–² | Chr13 | A | 153.525 |
miR169b-Em10 | Chr19 | D | 64.043 | T-TC29763â–² | Chr13 | A | 153.525 |
miR169b-Em29b | Chr10 | A | 87.599 | T-TC29763â–² | Chr13 | A | 153.525 |
miR172-Me6★ | Chr21 | D | 149.272 | T-TC30742 | Chr10 | A | 123.541 |
T-TC33909 | Chr16 | D | 82.967 | ||||
T-TC41731 | Chr20 | D | 80.438 | ||||
miR172-Me10★ | Chr10 | A | 92.823 | T-TC30742 | Chr10 | A | 123.541 |
T-TC33909 | Chr16 | D | 82.967 | ||||
T-TC41731 | Chr20 | D | 80.438 | ||||
miR172-Me49a★ | Chr13 | A | 76.047 | T-TC30742 | Chr10 | A | 123.541 |
T-TC33909 | Chr16 | D | 82.967 | ||||
T-TC41731 | Chr20 | D | 80.438 | ||||
miR172-Me49b★ | Chr10 | A | 134.949 | T-TC30742 | Chr10 | A | 123.541 |
T-TC33909 | Chr16 | D | 82.967 | ||||
T-TC41731 | Chr20 | D | 80.438 | ||||
miR172-Em20★ | Chr21 | D | 229.243 | T-TC30742 | Chr10 | A | 123.541 |
T-TC33909 | Chr16 | D | 82.967 | ||||
T-TC41731 | Chr20 | D | 80.438 | ||||
miR393-Me4 | Chr08 | A | 67.257 | T-TC38219 | Chr08 | A | 65.478 |
miR393-Me42 | Chr12 | A | 154.801 | T-TC38219 | Chr08 | A | 65.478 |
miR393-Em1 | Chr16 | D | 44.796 | T-TC38219 | Chr08 | A | 65.478 |
miR395-Me4★ | Chr19 | D | 18.742 | T-CO128820 | Chr18 | D | 65.452 |
T-TC30287 | Chr26 | D | 162.675 | ||||
miR396-Me7★ | Chr07 | A | 85.357 | T-TC35055b▲ | Chr05 | A | 155.907 |
T-TC39199â–² | Chr12 | A | 35.006 | ||||
T-TC35055aâ–² | Chr19 | D | 95.301 | ||||
miR396-Me43★ | Chr10 | A | 53.687 | T-TC35055b▲ | Chr05 | A | 155.907 |
T-TC39199â–² | Chr12 | A | 35.006 | ||||
T-TC35055aâ–² | Chr19 | D | 95.301 | ||||
miR396a-DX562190★ | Chr16 | D | 73.216 | T-TC35055b▲ | Chr05 | A | 155.907 |
T-TC39199â–² | Chr12 | A | 35.006 | ||||
T-TC35055aâ–² | Chr19 | D | 95.301 | ||||
miR397-Me49★ | Chr09 | A | 145.396 | T-AW730829 | Chr11 | A | 226.873 |
T-TC31021â–² | Chr19 | D | 0 | ||||
miR397a-DW490000★ | Chr04 | A | 59.354 | T-TC31021▲ | Chr19 | D | 0 |
miR403-Me35 | Chr02 | A | 71.74 | T-CO078480 | Chr13 | A | 194.48 |
miR403-Em27 | Chr11 | A | 146.949 | T-CO078480 | Chr13 | A | 194.48 |
miR403-Me20 | Chr17 | D | 84.782 | T-CO078480 | Chr13 | A | 194.48 |
miR479-ES809290a | Chr26 | D | 44.775 | T-TC31154 | Chr18 | D | 121.25 |