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Table 1 Distribution of mapped reads to annotated features in the C. glutamicum 13032 genome in two different sequencing libraries

From: Comprehensive discovery and characterization of small RNAs in Corynebacterium glutamicumATCC 13032

Annotated feature category

sRNA primary transcriptsa(library 1)

Whole sRNA transcripts (library 2)

 

Reads

[%]

Reads

[%]

rRNA genes

255,591

3.2

5,230,021

23.0

tRNA genes

1,050,962

13.4

2,130,360

9.3

mRNA genes (CDS, sense)

1,686,575

21.4

7,134,344

31.4

Potential sRNA fraction (remaining set of mapped reads)

    

cis-antisense (CDS, antisense)

242,429

3.1

450,589

2.0

Regions with no annotated features

4,634,302

58.9

7,807,065

34.3

Total

7,869,859

 

22,752,379

 
  1. asRNA primary transcripts were obtained using a 5′-monophosphate-specific exonuclease which degrades specifically transcripts that are either processed or undergoing degradation.