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Table 1 List of the top 30 most abundant ESTs in B. sudeticus

From: De novo transcriptome profiling uncovers a drastic downregulation of photosynthesis upon nitrogen deprivation in the nonmodel green alga Botryosphaerella sudeticus

Rka

EIDb

Level

Ratio

Genome

PIDc

Descriptiond

1

3556

4.03

-0.50

Chlre4

376403

 

2

318

3.98

-0.24

Chlre4

322197

RP-S29e, RPS29; small subunit ribosomal protein S29e

3

5

3.81

0.20

Chlre4

395228

 

4

36952

3.78

0.16

ChlNC64A

28889

 

5

106

3.70

-0.04

Chlre4

155068

 

6

57

3.69

0.18

Chlre4

407233

Glucan1,4-alpha-glucosidase.

7

8

3.67

-0.21

Chlre4

195592

RP-S20e, RPS20; small subunit ribosomal protein S20e

8

520

3.65

-0.03

Chlre4

195131

RP-L22e, RPL22; large subunit ribosomal protein L22e

9

127

3.62

0.05

Chlre4

418234

 

10

142

3.61

-0.06

Chlre4

128309

RP-L44e, RPL44; large subunit ribosomal protein L44e

11

512

3.56

-0.12

Chlre4

194928

RP-L38e, RPL38; large subunit ribosomal protein L38e

12

181

3.50

0.10

Chlre4

127247

RP-L35Ae, RPL35A; large subunit ribosomal protein L35Ae

13

633

3.45

-0.33

Chlre4

206640

rbcS; ribulose-bisphosphate carboxylase small chain[EC:4.1.1.39]

14

316

3.41

0.00

Chlre4

129742

RP-S21e, RPS21; small subunit ribosomal protein S21e

15

31

3.38

0.05

Chlre4

57302

RP-S25e, RPS25; small subunit ribosomal protein S25e

16

9

3.30

-0.26

Chlre4

166012

RP-L30e, RPL30; large subunit ribosomal protein L30e

17

311

3.26

0.09

Chlre4

191758

RP-L32e, RPL32; large subunit ribosomal protein L32e

18

1207

3.26

0.16

ChlNC64A

144034

 

19

114

3.23

-0.33

Chlre4

344365

 

20

590

3.19

-0.18

Chlre4

195601

RP-S17e, RPS17; small subunit ribosomal protein S17e

21

1921

3.18

0.21

Chlre4

195587

RP-L11e, RPL11; large subunit ribosomal protein L11e

22

287

3.17

-0.06

Chlre4

292191

 

23

282

3.16

-0.41

Chlre4

195585

RP-L10Ae, RPL10A; large subunit ribosomal protein L10Ae

24

50

3.16

-0.84

Chlre4

156131

TC.AMT; ammonium transporter, Amt family

25

20

3.15

0.45

Chlre4

120079

SIRT2, SIR2L2; NAD-dependent deacetylase sirtuin 2 [EC:3.5.1.-]; in linear amides.

26

1000

3.14

-0.26

Chlre4

126853

RP-L37Ae, RPL37A; large subunit ribosomal protein L37Ae

27

480

3.14

-0.16

Chlre4

78109

RP-L31e, RPL31; large subunit ribosomal protein L31e

28

296

3.12

-0.24

Chlre4

36709

 

29

278

3.12

0.01

Chlre4

145271

RP-L14e, RPL14; large subunit ribosomal protein L14e

30

545

3.11

-0.07

Chlre4

153674

 
  1. Note: a, rank; b, EST ID; c, Protein ID in C. reinhardtii or C. variabilis; d, EST function based on its best hit protein.