Table 3 Statistics of radish simple sequence repeats (SSRs)
From: Comprehensive analysis of expressed sequence tags from cultivated and wild radish (Raphanus spp.)
Nucleotide type | No. SSR | Repeat type | No. SSR | Motif type | No. SSR |
|---|---|---|---|---|---|
Di-nucleotide | 5,918 | 5 | 4,117 | TC/GA | 2,440 |
Tri-nucleotide | 6,651 | 6 | 3,959 | AG/CT | 2,384 |
Tetra-nucleotide | 170 | 7 | 1,992 | TCT/AGA | 841 |
Penta-nucleotide | 63 | 8 | 1,067 | GAA/TTC | 776 |
Hexa-nucleotide | 50 | 9 | 602 | CTT/AAG | 711 |
Compound form | 718 | 10 | 340 | GAT/ATC | 468 |