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Table 1 Mapping of RNA-seq data

From: Quantitative trait loci-dependent analysis of a gene co-expression network associated with Fusarium head blight resistance in bread wheat (Triticum aestivumL.)

Line

Cufflinks

Barley BBH

DEG (barley BBH)

CM-82036

183,540

15,360

1,956 (13%)

NIL1

189,486

15,797

1,781 (11%)

NIL2

196,078

15,734

2,067 (13%)

NIL3

192,584

15,676

1,954 (12%)

NIL4

186,755

15,680

2,005 (13%)

  1. Overview of generated cufflinks genes with the corresponding number of barley best bi-directional hits (BBH) as well as the number of differentially expressed genes (DEG) is given. Overall 233,780 cufflinks genes were found in all five lines, with 151,853 genes in common.
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BMC Genomics

ISSN: 1471-2164

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