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Table 1 Mapping of reads to genome and miRBase v18 after rRNA, tRNA, repeated DNA and adaptor sequences filtering

From: High-throughput sequencing of small RNA transcriptomes reveals critical biological features targeted by microRNAs in cell models used for squamous cell cancer research

 

SCC25 (million)

%

Kerat (million)

%

Total of reads

3.4

100

4.4

100

Reads matching miRBase V18

0.09

2.64

0.14

3.1

Reads matching mature miRNAs

0.07

2.00

0.9

1.94

Reads mapped to genome and not matching v18

0.13

3.97

0.07

4.53