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Figure 3 | BMC Genomics

Figure 3

From: Probing functional polymorphisms in the dengue vector, Aedes aegypti

Figure 3

Novel Transcriptional Units. A) total number of novel transcriptional units (NTUs) identified using the Ae. aegypti genome annotation ( AaegL1.2) (left column) as a guide in mapping RNA-seq reads and number of NTUs not within specific distance (WND) in base-pairs (bp) of known exons (right column). B) the 2482 NTUs identified outside a 10,000 bp distance from annotated exons are classified individually (LVP, CTM, RexD) and cumulatively (in all three strains) on the basis of RNA-seq read coverage in FPKM. C) functional classification of the 2025 NTUs found with similar coverage across the three strains. Abbreviations: cuticular protein (CP), immunity (IMM), metabolism (MET), oxido-reductase (REDOX), ribosomal protein (RP), transport (TR), related to transposons (TRANSPOSON), signal transduction (ST), transcription and translation (TT), unknown (UNK), unknown and blasting to hypothetical or conserved proteins from Anophelinae mosquitoes (UNK-A), Culex quinquefasciatus (UNK-CQ), Drosophilidae flies (UNK-D) and diverse functions (DIV).

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