Table 2 Differential expression of genes related to the immune response
From: Inflammatory responses in primary muscle cell cultures in Atlantic salmon (Salmo salar)
Gene ID1 | Annotation2 | Mean fold change± SE3 | Identity4 |
|---|---|---|---|
Ssa#S24188435 | AY929386 | 216.3 ± 58.8 | TNFα 2 |
Omy#gi185133433 | NM_001124347 | 197.9 ± 79.1 | IL-1B |
Ssa#STIR00083_4 | AY929385 | 99.2 ± 17.9 | TNFα 1 |
Omy#gi13235345 | AJ279069 | 93.3 ± 15.4 | IL-8 |
Ssa#S34822137 | AM397592 | 29.7 ± 5.1 | Complement c3 |
Ssa#STIR04816 | BT047247 | 25.5 ± 13.1 | Hepcidin |
Omy#S37211068 | EF175381 | 20.7 ± 1.1 | Prostaglandin G/H synthase 2b |
Ssa#STIR08688 | TC65065 | 17.9 ± 4.9 | Ferritin |
Ssa#S21512941 | AY572832 | 16.1 ± 0.2 | C type lectin receptor A |
Ssa#STIR35259 | NM_001124618 | 13.8 ± 0.9 | Complement protein component c7-1 |
Ssa#STIR23928 | NM_001124410.1 | 13.3 ± 10.8 | Complement factor H precursor |
Ssa#S43134841_S | NM_001123611 | 9.5 ± 2.5 | CD4-like protein |
Ssa#STIR00084_4 | DW569632 | 8.5 ± 0.3 | NF-kappa-b inhibitor alpha |
Ssa#S18892257 | AJ505008 | 3.9 ± 0.3 | IL-1 receptor accessory protein |
Ssa#STIR14647 | TC73172 | 3.9 ± 0.0 | MAP kinase-interacting serine/threonine kinase 2 |
Ssa#S30276405 | DW563373 | 3.9 ± 0.2 | Suppressor of cytokine signaling 1 |
Ssa#S35660755 | EG895473 | 3.4 ± 0.3 | NF-kappa-B p100 subunit |
Ssa#S35667643 | EG902361 | 3.4 ± 0.2 | Complement c1q-like protein 4 |
Ssa#S31992293 | DY720890 | 3.2 ± 0.2 | IL-10 receptor beta chain precursor |
Omy#gi197927463 | NM_001124396 | 3.0 ± 0.2 | IL-1 receptor antagonist |
Ssa#KSS392 | NM_001141766 | 2.9 ± 0.3 | IL-1 receptor-associated kinase 4 |
Ssa#CB516003 | CB516003 | 2.8 ± 0.3 | NF-kappa-B 1 p105 subunit |
Ssa#KSS3660 | BT059477 | 2.8 ± 0.3 | NF-kappa-B inhibitor epsilon |
Ssa#STIR08793 | TC65192 | 2.8 ± 0.1 | Suppressor of cytokine signaling 3 |
Ssa#STIR00087_4 | DW555246 | 2.7 ± 0.2 | IL-10 |
Ssa#STIR12117 | TC69580 | 2.3 ± 0.1 | Transcription factor jun-B |
Omy#S18157537 | BX883008 | 2.1 ± 0.1 | Interleukin-6 receptor subunit alpha precursor |
Ssa#DW006091 | DW006091 | 2.1 ± 0.2 | MHC class i antigen |
Ssa#TC106540 | TC106540 | −2.4 ± 0.1 | TNF receptor-associated factor 6 |
Ssa#STIR08822 | TC65229 | −2.6 ± 0.1 | IL-15 |
Ssa#S18849636_S | BT071912.1 | −2.6 ± 0.2 | Complement C4-1 |
Ssa#S35693513 | EG928231 | −3.3 ± 0.8 | Complement component 6 precursor |
Ssa#S35687715 | EG922433 | −22.7 ± 8.3 | Complement factor D precursor |