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Table 2 Count and percentage of changes given by small variants by type of change for each genotype

From: Heterogeneity in the entire genome for three genotypes of peach [Prunus persica(L.) Batsch] as distinguished from sequence analysis of genomic variants

Type of change (alphabetical order)   'Georgia Belle’   'Dr. Davis’   'F8,1-42’
Count Percent Count Percent Count Percent
Codon Change + Codon Deletion 98 0.01% 64 0.01% 95 0.01%
Codon Change + Codon Insertion 125 0.012% 79 0.013% 131 0.013%
Codon Deletion 143 0.014% 82 0.013% 135 0.014%
Codon Insertion 56 0.005% 35 0.006% 63 0.006%
Frame Shift 1,134 0.11% 847 0.134% 1,284 0.132%
Non-Synonymous-Coding 25,607 2.489% 15,537 2.464% 28,699 2.953%
Non-Synonymous-Start 6 0.001% 2 0.0005% 4 0.0001%
Start Gained 258 0.025% 169 0.027% 211 0.032%
Start Lost 49 0.005% 35 0.006% 42 0.004%
Stop Gained 635 0.062% 499 0.079% 947 0.097%
Stop Lost 75 0.007% 45 0.007% 70 0.007%
Synonymous Coding 17,743 1.725% 10,217 1.62% 20,046 2.062%
Synonymous Stop 25 0.002% 16 0.003% 38 0.004%