From: Life based on phosphite: a genome-guided analysis of Desulfotignum phosphitoxidans
COG categories | Gene count | % of total (4699) |
---|---|---|
I. Information storage and processing: | Â | Â |
  Translation, ribosomal structure and biogenesis | 171 | 3.63 |
  Transcription | 222 | 4.72 |
  DNA replication, recombination and repair | 160 | 3.40 |
II. Cellular process: | Â | Â |
  Cell cycle control and division, chromosome partitioning | 48 | 1.02 |
  Posttranslational modification, protein turnover, chaperones | 117 | 2.49 |
  Cell envelope biogenesis, outer membrane | 256 | 5.45 |
  Cell motility | 56 | 1.19 |
  Intracellular trafficking, secretion, vesicular transport | 103 | 2.19 |
  Inorganic ion transport and metabolism | 209 | 4.45 |
  - Phosphorus metabolism (phosphate, phosphite and organophosphonates | 31 |  |
  - Sulphur and nitrogen | 22 |  |
  - Other | 156 |  |
  Signal transduction mechanisms | 354 | 7.53 |
  Defence mechanisms/Stress | 78 | 1.66 |
III. Metabolism: | Â | Â |
  Energy production and conversion | 424 | 9.02 |
  Carbohydrate transport and metabolism | 182 | 3.87 |
  - Phosphorus – related (PTS system and sugar phosphate permeases) | 14 |  |
  Amino acid transport and metabolism | 332 | 7.06 |
  Nucleotide transport and metabolism | 66 | 1.41 |
  Coenzyme metabolism | 204 | 4.34 |
  Lipid metabolism | 127 | 2.70 |
  Secondary metabolites biosynthesis, transport and catabolism | 84 | 1.79 |
IV. General function prediction only | 491 | 10.45 |
V. Unknown function | 309 | 6.58 |
VI. Not in COGs | 1051 | 22.37 |