Table 1 Putative functions assigned to Xff 4834-R CDSs according to Riley classification [35]

1. Metabolism

GO:0008152

1,248

1.1. Carbon compounds utilization

142

1.2. Macromolecules degradation

GO:0009057

151

1.3 Energy metabolism (carbon)

GO:0015980

83

1.4 Energy production/transport

57

1.5. Building block biosynthesis

260

1.6. Macromolecules biosynthesis

GO:0009059

214

1.7. Central intermediary metabolism

82

1.8. Metabolism of other compounds

20

2. Information transfer

371

3. Regulation

GO:0050789

360

4. Transport

GO:0005215, GO:0006810

489

5. Cell processes

GO:0009987

186

6. Cell structure

GO:0005575

34

7. Location of gene products

GO:0005575

199

8. Extrachromosomal

136

9. DNA sites

10. Cryptic genes

1,060