Table 1 Cytoskeleton-related genes differentially transcribed in compression (CW) and opposite wood (OW) formed in branches
Xylem tissues | Differentially transcribed genes* | Representing ESTs | GenBank accession | Log-2 ratios | P-values |
|---|---|---|---|---|---|
CW-spring | Actin | TWL22A2 | FE523923 | 1.532 | 0.048 |
CW-spring | Actin 3 | MWL23B3 | GO269503 | 0.905 | 0.003 |
CW-autumn | Actin 3 | JWLxF8 | FE521083 | 0.574 | 0.033 |
CW-autumn | Actin 7 | JWEeC7 | FE518833 | 2.150 | 0.048 |
CW-spring | Actin 7 | TWE23D12 | FE523186 | 1.794 | 0.050 |
CW-spring | Actin bundling protein ABP135 | TWE5D1 | FE523228 | 0.800 | 0.010 |
CW-autumn | Actin depolymerizing factor | MWE24D11 | FE521861 | 2.167 | 0.034 |
CW-spring | Actin depolymerizing factor | MWE5G10 | FE521693 | 1.772 | 0.047 |
CW-autumn | Actin depolymerizing factor-like | JWEqB11 | FE518555 | 0.664 | 0.011 |
CW-spring | Actin filament bundling protein P-115 | JWL19E9 | FE521315 | 1.676 | 0.048 |
CW-autumn | Actin filament bundling protein P-115 | JWL19E9 | FE521315 | 1.539 | 0.016 |
CW-autumn | Actin related protein 2 | JWLfF5 | FE519755 | 1.159 | 0.035 |
CW-autumn | Actin related protein 3 | JWEmB5 | FE518964 | 1.211 | 0.040 |
CW-autumn | Tubulin alpha | JWEbH8 | FE519649 | 1.942 | 0.049 |
CW-spring | Tubulin alpha 1 | JWEsG6 | FE519115 | 1.580 | 0.033 |
CW-autumn | Tubulin alpha 1 | TWL9D10 | FE524256 | 1.830 | 0.050 |
CW-spring | Tubulin beta | JWLlA9 | FE519966 | 1.944 | 0.037 |
CW-autumn | Tubulin beta 1 | JWLwC2 | FE520255 | 1.694 | 0.044 |
CW-spring | Tubulin beta 1 | JWLwC2 | FE520255 | 1.706 | 0.010 |
CW-spring | Tubulin beta 3 | MWE31B9 | FE521866 | 1.571 | 0.042 |
CW-spring | Tubulin beta 6 | MWL30D8 | FE522772 | 1.340 | 0.047 |
CW-autumn | Tubulin beta 6 | JWLrC8 | FE520019 | 1.557 | 0.032 |
CW-spring | Tubulin beta 7 | JWLhG4 | FE520687 | 1.993 | 0.024 |
CW-spring | Tubulin folding cofactor B | TWL22B11 | FE524340 | 2.023 | 0.050 |
CW-autumn | Microtubial binding protein | MWE30H10 | FE521906 | 0.650 | 0.026 |
CW-autumn | MAP-like | MWE9A10 | FE521409 | 1.479 | 0.009 |
CW-spring | MAP kinase-like | MWE31C11 | FE521885 | 1.888 | 0.015 |
OW-spring | Actin 2 | TWE16C11 | FE523366 | -1.470 | 0.049 |
OW-autumn | Actin 2 | MWL29C3 | FE522532 | -2.139 | 0.049 |
OW-autumn | Actin bundling protein ABP135 | TWE5D1 | FE523228 | -1.162 | 0.019 |
OW-autumn | Actin related protein 6 | TWE4H5 | FE523100 | -2.163 | 0.042 |
OW-autumn | Tubulin folding cofactor A | MWL33E1 | FE522629 | -1.448 | 0.000 |
OW-spring | MAP | JWLlA3 | FE520828 | -1.777 | 0.043 |
OW-autumn | MAP | JWL11A8 | FE521181 | -1.328 | 0.043 |
OW-autumn | MAP kinase | JWEiD6 | FE518418 | -1.342 | 0.010 |
OW-autumn | MAP kinase phosphatase | MWE1B4 | FE521481 | -1.621 | 0.007 |
OW-spring | MAPKK | TWE5D10 | FE523280 | -1.982 | 0.014 |
OW-autumn | MAPKK | TWE5D10 | FE523280 | -1.914 | 0.034 |