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Table 4 Cell wall structural protein genes differentially transcribed in compression (CW) and opposite wood (OW) formed in branches

From: Transcriptome profiling of radiata pine branches reveals new insights into reaction wood formation with implications in plant gravitropism

Xylem tissues

Differentially transcribed genes*

Representing ESTs

GenBank accession

Log-2 ratios

P-values

CW-spring

Arabinogalactan/proline-rich protein, AGP4

MWE13B9

FE521826

1.559

0.050

CW-spring

Arabinogalactan protein 5, AGP5

TWL29C3

FE524468

1.593

0.037

CW-autumn

Arabinogalactan protein 5, AGP5

TWL1A1

FE524552

2.018

0.049

CW-spring

Arabinogalactan protein 6, AGP6

JWEmA4

FE518957

1.330

0.038

CW-autumn

Arabinogalactan protein 6, AGP6

JWLtE9

FE520147

2.009

0.035

CW-spring

Arabinogalactan-like

MWE12B5

FE518750

1.826

0.031

CW-autumn

Arabinogalactan-like

MWE12B5

FE518750

1.466

0.046

CW-spring

FLA1

MWL28F5

FE522423

0.421

0.004

CW-spring

FLA8

JWLxF4

FE521059

2.546

0.029

CW-autumn

FLA8

JWLxF4

FE521059

1.911

0.037

CW-spring

Glycine-rich protein 1

MWE6G10

FE521816

2.044

0.017

CW-autumn

Glycine-rich protein 1

MWE6G10

FE521816

1.469

0.016

CW-spring

Glycine-rich protein 2

JWEgF6

FE519572

1.577

0.039

CW-autumn

Glycine-rich protein 2

JWErH8

FE519061

1.519

0.031

CW-spring

Proline-rich protein

MWE5D11

FE521995

1.521

0.047

CW-spring

Plastocyanin-like

TWL16D4

FE523902

1.464

0.044

CW-autumn

Plastocyanin-like

TWL26B4

FE524367

1.525

0.049

CW-autumn

Plantacyanin

TWL22G11

GO269524

1.513

0.043

CW-spring

Uclacyanin 3

TWL19C11

FE524322

1.104

0.020

CW-autumn

Uclacyanin 3

TWL19C11

FE524322

1.433

0.028

CW-spring

Blue copper protein

JWLbE4

FE519677

1.944

0.042

CW-autumn

Blue copper protein

TWL19E3

GO269525

2.235

0.047

OW-autumn

FLA10

MWE16A4

FE522128

-1.654

0.003

OW-autumn

FLA17

TWL29A10

FE524499

-1.736

0.050

OW-autumn

FLA26

TWE27C11

FE523610

-2.270

0.049

  1. *FLA, fasciclin-like arabinogalactan protein.