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Table 4 Cell wall structural protein genes differentially transcribed in compression (CW) and opposite wood (OW) formed in branches

From: Transcriptome profiling of radiata pine branches reveals new insights into reaction wood formation with implications in plant gravitropism

Xylem tissues Differentially transcribed genes* Representing ESTs GenBank accession Log-2 ratios P-values
CW-spring Arabinogalactan/proline-rich protein, AGP4 MWE13B9 FE521826 1.559 0.050
CW-spring Arabinogalactan protein 5, AGP5 TWL29C3 FE524468 1.593 0.037
CW-autumn Arabinogalactan protein 5, AGP5 TWL1A1 FE524552 2.018 0.049
CW-spring Arabinogalactan protein 6, AGP6 JWEmA4 FE518957 1.330 0.038
CW-autumn Arabinogalactan protein 6, AGP6 JWLtE9 FE520147 2.009 0.035
CW-spring Arabinogalactan-like MWE12B5 FE518750 1.826 0.031
CW-autumn Arabinogalactan-like MWE12B5 FE518750 1.466 0.046
CW-spring FLA1 MWL28F5 FE522423 0.421 0.004
CW-spring FLA8 JWLxF4 FE521059 2.546 0.029
CW-autumn FLA8 JWLxF4 FE521059 1.911 0.037
CW-spring Glycine-rich protein 1 MWE6G10 FE521816 2.044 0.017
CW-autumn Glycine-rich protein 1 MWE6G10 FE521816 1.469 0.016
CW-spring Glycine-rich protein 2 JWEgF6 FE519572 1.577 0.039
CW-autumn Glycine-rich protein 2 JWErH8 FE519061 1.519 0.031
CW-spring Proline-rich protein MWE5D11 FE521995 1.521 0.047
CW-spring Plastocyanin-like TWL16D4 FE523902 1.464 0.044
CW-autumn Plastocyanin-like TWL26B4 FE524367 1.525 0.049
CW-autumn Plantacyanin TWL22G11 GO269524 1.513 0.043
CW-spring Uclacyanin 3 TWL19C11 FE524322 1.104 0.020
CW-autumn Uclacyanin 3 TWL19C11 FE524322 1.433 0.028
CW-spring Blue copper protein JWLbE4 FE519677 1.944 0.042
CW-autumn Blue copper protein TWL19E3 GO269525 2.235 0.047
OW-autumn FLA10 MWE16A4 FE522128 -1.654 0.003
OW-autumn FLA17 TWL29A10 FE524499 -1.736 0.050
OW-autumn FLA26 TWE27C11 FE523610 -2.270 0.049
  1. *FLA, fasciclin-like arabinogalactan protein.
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