Skip to main content

Table 6 Genes responding to environmental stresses differentially transcribed in compression (CW) and opposite wood (OW) formed in branches

From: Transcriptome profiling of radiata pine branches reveals new insights into reaction wood formation with implications in plant gravitropism

Xylem tissues

Differentially transcribed genes

Representing ESTs

GenBank accession

Log-2 ratios

P-values

CW-autumn

Aquaporin

MWL5E11

FE522873

2.002

0.045

CW-spring

Water deficit inducible protein

TWE12B12

FE523997

2.102

0.008

CW-autumn

Water deficit inducible protein

TWE12B12

FE523997

1.059

0.008

CW-spring

Dehydrin

TWL14B4

FE524283

1.415

0.036

CW-autumn

Dehydrin

TWL36E7

FE524023

2.125

0.045

CW-spring

Dehydrin 1

JWLwA1

FE520245

2.175

0.019

CW-spring

Dehydration-responsive protein-like

TWL17D5

FE523858

1.534

0.038

CW-spring

Light-inducible protein ATLS1

MWE5D1

FE521627

1.785

0.039

CW-autumn

Light-inducible protein ATLS1

TWL27A8

GO269536

1.648

0.039

CW-spring

Light-induced protein like

JWEcC9

FE518768

0.932

0.051

CW-spring

Phytochrome

TWL37H8

FE524199

1.347

0.044

CW-autumn

Phytochrome

TWL5H7

FE524072

1.945

0.046

CW-spring

Disease resistance gene

JWLlA4

FE520833

1.733

0.043

CW-autumn

Disease resistance gene

TWL36H4

FE523993

1.454

0.044

CW-autumn

nucleotide-binding site (NBS) protein

JWLjF7

FE519913

0.969

0.041

CW-spring

TIR/P-loop/LRR

TWL27G11

FE524445

1.159

0.032

CW-spring

Multidrug resistance associated protein 1

JWLwF8

FE520296

1.350

0.034

CW-spring

Multidrug resistance associated protein 6

MWE4G8

FE521986

1.228

0.002

CW-spring

Salt tolerance protein 1

JWLxA5

FE521062

1.569

0.047

CW-autumn

Salt tolerance protein 1

JWLxA5

FE521062

1.515

0.039

CW-spring

Salt tolerance protein 4

MWE29C5

FE521898

1.798

0.048

CW-autumn

Salt-induced AAA-Type ATPase

JWE1D5

FE519463

0.998

0.024

OW-autumn

NBS/LRR

MWL21G9

FE523021

-1.441

0.042

OW-spring

Aluminium induced protein

TWL29A2

FE524459

-1.615

0.044