Skip to main content

Table 2 Statistical summary of the reads aligned against the set of contigs and full-length cDNAs in TriFLDB

From: Characterisation of the wheat (triticum aestivum L.) transcriptome by de novo assembly for the discovery of phosphate starvation-responsive genes: gene expression in Pi-stressed wheat

Tissue

Total aligned

Unique-hit

%

Multi-hit

%

Unaligned

%

Root_0d

21,505,572

8,793,897

40.9

2,166,997

10.1

10,544,678

49.0

Root_10d

20,619,073

8,161,939

39.6

1,971,013

9.6

10,486,121

50.9

Shoot_0d

37,116,104

17,335,224

46.7

6,676,313

18

13,104,567

35.3

Shoot_10d

36,254,449

16,839,214

46.4

6,046,477

16.7

13,368,758

36.9

  1. TriFLDB: http://trifldb.psc.riken.jp/index.pl.
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us